SMTL ID : 4npy.2 (1 other biounit)

Crystal structure of germline Fab PGT121, a putative precursor of the broadly reactive and potent HIV-1 neutralizing antibody

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: Y.48, P.54, S.55 Chain B: L.99, Y.118, D.120 6 PLIP interactions: 2 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:S.55, B:R.97, B:Y.118, B:Y.118, B:D.120 Water bridges: A:S.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sok, D. et al., The Effects of Somatic Hypermutation on Neutralization and Binding in the PGT121 Family of Broadly Neutralizing HIV Antibodies. Plos Pathog. (2013)

Release Date

2013-12-11

Peptides

germline PGT121 light chain: A
germline PGT121 heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

germline PGT121 light chain

germline PGT121 heavy chain

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