SMTL ID : 4nwv.1 (4 other biounits)

Crystal structure of Orsay virus-like particle

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.25 Å

Oligo State

homo-trimer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: Q.92, E.166 Chain B: D.122, D.125 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:D.122, B:D.125 CA.2: 4 residues within 4Å: Chain A: D.122, D.125 Chain C: Q.92, E.166 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.122, A:D.125 CA.3: 5 residues within 4Å: Chain B: Q.92, E.166 Chain C: D.122, D.125, R.176 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:E.166

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, Y.R. et al., Crystal structure of a nematode-infecting virus. Proc.Natl.Acad.Sci.USA (2014)

Release Date

2014-08-20

Peptides

Capsid protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
B

Capsid protein

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