- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.28 Å
- Oligo State
- homo-tetramer
- Ligands
- 23 x GOL: GLYCEROL(Non-functional Binders)
- 45 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 4 residues within 4Å:- Chain A: G.278, L.279, R.325, Y.358
Ligand excluded by PLIPSO4.6: 2 residues within 4Å:- Chain A: H.117, R.224
Ligand excluded by PLIPSO4.7: 3 residues within 4Å:- Chain A: H.17, W.21, P.225
Ligand excluded by PLIPSO4.8: 2 residues within 4Å:- Chain A: D.338, E.339
Ligand excluded by PLIPSO4.9: 1 residues within 4Å:- Chain A: R.80
Ligand excluded by PLIPSO4.10: 5 residues within 4Å:- Chain A: E.173, G.174, A.175, Q.176, A.177
Ligand excluded by PLIPSO4.11: 5 residues within 4Å:- Chain A: Y.271, K.272
- Chain B: T.209, H.239, L.242
Ligand excluded by PLIPSO4.12: 4 residues within 4Å:- Chain A: G.206, T.207, P.236, H.239
Ligand excluded by PLIPSO4.13: 2 residues within 4Å:- Chain A: R.392, P.432
Ligand excluded by PLIPSO4.14: 4 residues within 4Å:- Chain A: V.422, K.423, H.424, Q.425
Ligand excluded by PLIPSO4.25: 2 residues within 4Å:- Chain B: H.117, R.224
Ligand excluded by PLIPSO4.26: 3 residues within 4Å:- Chain B: H.17, W.21, P.225
Ligand excluded by PLIPSO4.27: 2 residues within 4Å:- Chain B: T.310, K.311
Ligand excluded by PLIPSO4.28: 3 residues within 4Å:- Chain B: R.365, E.366, N.367
Ligand excluded by PLIPSO4.29: 4 residues within 4Å:- Chain B: E.333, R.335, D.336
- Ligands: SO4.34
Ligand excluded by PLIPSO4.30: 5 residues within 4Å:- Chain A: T.209, H.239, L.242
- Chain B: Y.271, K.272
Ligand excluded by PLIPSO4.31: 4 residues within 4Å:- Chain B: Q.176, K.217, R.221
- Ligands: GOL.18
Ligand excluded by PLIPSO4.32: 4 residues within 4Å:- Chain B: G.206, T.207, P.236, H.239
Ligand excluded by PLIPSO4.33: 2 residues within 4Å:- Chain B: R.411, K.416
Ligand excluded by PLIPSO4.34: 4 residues within 4Å:- Chain B: D.42, E.43, R.335
- Ligands: SO4.29
Ligand excluded by PLIPSO4.41: 2 residues within 4Å:- Chain C: R.392, P.432
Ligand excluded by PLIPSO4.42: 3 residues within 4Å:- Chain C: E.333, R.335, D.336
Ligand excluded by PLIPSO4.43: 2 residues within 4Å:- Chain C: T.310, K.311
Ligand excluded by PLIPSO4.44: 3 residues within 4Å:- Chain C: R.365, E.366, N.367
Ligand excluded by PLIPSO4.45: 2 residues within 4Å:- Chain C: H.117, R.224
Ligand excluded by PLIPSO4.46: 2 residues within 4Å:- Chain C: K.217, R.221
Ligand excluded by PLIPSO4.47: 3 residues within 4Å:- Chain C: Q.176, R.221
- Ligands: GOL.40
Ligand excluded by PLIPSO4.48: 2 residues within 4Å:- Chain C: K.53, Y.54
Ligand excluded by PLIPSO4.49: 3 residues within 4Å:- Chain C: H.17, W.21, P.225
Ligand excluded by PLIPSO4.50: 4 residues within 4Å:- Chain C: G.206, T.207, P.236, H.239
Ligand excluded by PLIPSO4.51: 6 residues within 4Å:- Chain C: Y.271, K.272
- Chain D: T.209, D.238, H.239, L.242
Ligand excluded by PLIPSO4.52: 3 residues within 4Å:- Chain C: G.278, L.279, R.325
Ligand excluded by PLIPSO4.53: 4 residues within 4Å:- Chain C: V.422, K.423, H.424, Q.425
Ligand excluded by PLIPSO4.60: 2 residues within 4Å:- Chain D: H.117, R.224
Ligand excluded by PLIPSO4.61: 3 residues within 4Å:- Chain D: H.17, W.21, P.225
Ligand excluded by PLIPSO4.62: 4 residues within 4Å:- Chain D: G.278, L.279, R.325, Y.358
Ligand excluded by PLIPSO4.63: 5 residues within 4Å:- Chain C: T.209, H.239, L.242
- Chain D: Y.271, K.272
Ligand excluded by PLIPSO4.64: 2 residues within 4Å:- Chain D: T.310, K.311
Ligand excluded by PLIPSO4.65: 1 residues within 4Å:- Chain D: R.80
Ligand excluded by PLIPSO4.66: 4 residues within 4Å:- Chain D: Q.176, K.217, R.221
- Ligands: GOL.56
Ligand excluded by PLIPSO4.67: 3 residues within 4Å:- Chain D: E.366, N.367, D.368
Ligand excluded by PLIPSO4.68: 3 residues within 4Å:- Chain D: D.42, E.43, R.335
Ligand excluded by PLIPSO4.69: 2 residues within 4Å:- Chain D: R.392, P.432
Ligand excluded by PLIPSO4.70: 2 residues within 4Å:- Chain D: K.217, R.221
Ligand excluded by PLIPSO4.71: 4 residues within 4Å:- Chain D: G.206, T.207, P.236, H.239
Ligand excluded by PLIP- 3 x CIT: CITRIC ACID(Non-functional Binders)
CIT.15: 7 residues within 4Å:- Chain A: H.170, R.171, T.207, H.208, T.209, E.210, E.211
12 PLIP interactions:12 interactions with chain A- Hydrogen bonds: A:S.157, A:S.157, A:T.209, A:E.210, A:E.211, A:E.211
- Water bridges: A:D.154, A:T.209, A:T.209, A:T.209
- Salt bridges: A:H.170, A:R.171
CIT.35: 7 residues within 4Å:- Chain B: S.157, H.170, T.207, H.208, T.209, E.210, E.211
14 PLIP interactions:14 interactions with chain B- Hydrophobic interactions: B:E.210, B:E.210
- Hydrogen bonds: B:S.157, B:H.170, B:T.207, B:T.209, B:E.210, B:E.211, B:E.211
- Water bridges: B:R.129, B:H.170, B:R.171
- Salt bridges: B:R.171, B:H.208
CIT.54: 7 residues within 4Å:- Chain C: S.157, H.170, T.207, H.208, T.209, E.210, E.211
13 PLIP interactions:13 interactions with chain C- Hydrophobic interactions: C:E.210
- Hydrogen bonds: C:S.157, C:S.157, C:E.210, C:E.211
- Water bridges: C:R.129, C:H.170, C:R.171, C:R.171
- Salt bridges: C:H.170, C:R.171, C:H.208, C:H.208
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lansky, S. et al., Structure-specificity relationships in Abp, a GH27 beta-L-arabinopyranosidase from Geobacillus stearothermophilus T6. Acta Crystallogr.,Sect.D (2014)
- Release Date
- 2014-12-03
- Peptides
- Abp, a GH27 beta-L-arabinopyranosidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.28 Å
- Oligo State
- homo-tetramer
- Ligands
- 23 x GOL: GLYCEROL(Non-functional Binders)
- 45 x SO4: SULFATE ION(Non-functional Binders)
- 3 x CIT: CITRIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lansky, S. et al., Structure-specificity relationships in Abp, a GH27 beta-L-arabinopyranosidase from Geobacillus stearothermophilus T6. Acta Crystallogr.,Sect.D (2014)
- Release Date
- 2014-12-03
- Peptides
- Abp, a GH27 beta-L-arabinopyranosidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D