SMTL ID : 4o1m.1 (1 other biounit)

Toxoplasma gondii Enoyl acyl carrier protein reductase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 27 residues within 4Å: Chain A: G.16, V.17, A.18, G.22, Y.23, W.43, L.79, D.80, A.81, A.82, S.127, L.128, A.129, N.130, L.177, S.178, Y.179, Y.189, K.197, A.224, G.225, P.226, L.227, S.229, R.230, A.231, A.232 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:Y.179 Hydrogen bonds: A:G.16, A:A.18, A:Y.23, A:W.43, A:D.80, A:D.80, A:A.81, A:A.82, A:L.128, A:A.129, A:K.197, A:L.227, A:L.227, A:S.229, A:R.230, A:A.231 Water bridges: A:G.16, A:D.19, A:D.19, A:G.22, A:G.24, A:L.128, A:Y.189 pi-Stacking: A:Y.23 NAD.2: 24 residues within 4Å: Chain B: G.16, A.18, G.22, Y.23, W.43, L.79, D.80, A.81, A.82, S.127, L.128, A.129, N.130, L.177, S.178, Y.179, K.197, A.224, G.225, P.226, L.227, S.229, R.230, A.231 27 PLIP interactions: 27 interactions with chain B Hydrophobic interactions: B:Y.23, B:Y.179, B:A.224 Hydrogen bonds: B:G.16, B:A.18, B:Y.23, B:D.80, B:D.80, B:A.81, B:A.82, B:L.128, B:L.128, B:A.129, B:Y.189, B:K.197, B:L.227, B:L.227, B:S.229, B:R.230, B:A.231 Water bridges: B:G.16, B:D.19, B:D.19, B:G.22, B:G.24, B:W.43, B:Y.189 NAD.3: 26 residues within 4Å: Chain C: G.16, V.17, A.18, G.22, Y.23, W.43, L.79, D.80, A.81, A.82, S.127, L.128, A.129, N.130, L.177, S.178, Y.179, K.197, A.224, G.225, P.226, L.227, S.229, R.230, A.231, A.232 24 PLIP interactions: 24 interactions with chain C Hydrophobic interactions: C:Y.179, C:A.224 Hydrogen bonds: C:G.16, C:G.16, C:A.18, C:Y.23, C:D.80, C:A.81, C:A.82, C:L.128, C:A.129, C:K.197, C:L.227, C:L.227, C:S.229, C:R.230, C:A.231 Water bridges: C:V.17, C:G.22, C:G.24, C:W.43, C:L.128, C:Y.189 pi-Stacking: C:Y.23 NAD.4: 25 residues within 4Å: Chain D: G.16, V.17, A.18, G.22, Y.23, W.43, L.79, D.80, A.81, A.82, S.127, L.128, A.129, N.130, L.177, S.178, Y.179, K.197, A.224, G.225, P.226, L.227, S.229, R.230, A.231 25 PLIP interactions: 25 interactions with chain D Hydrophobic interactions: D:Y.23, D:Y.179 Hydrogen bonds: D:G.16, D:A.18, D:Y.23, D:D.80, D:A.81, D:A.82, D:L.128, D:A.129, D:Y.189, D:K.197, D:L.227, D:L.227, D:S.229, D:R.230, D:A.231 Water bridges: D:G.16, D:D.19, D:G.22, D:G.24, D:W.43, D:W.43, D:L.128, D:Y.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wilkinson, C. et al., The benzimidazole based drugs show good activity against T. gondii but poor activity against its proposed enoyl reductase enzyme target. Bioorg.Med.Chem.Lett. (2014)

Release Date

2014-02-05

Peptides

Enoyl-acyl carrier reductase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
E

Enoyl-acyl carrier reductase

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