SMTL ID : 4oh7.2 (1 other biounit)

Crystal structure of Ornithine carbamoyltransferase from Brucella melitensis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-trimer

Ligands

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: A.26, T.27, R.30 1 PLIP interactions: 1 interactions with chain A Water bridges: A:R.30 EDO.2: 5 residues within 4Å: Chain A: E.97, T.102, V.105 Chain B: T.66, R.67 6 PLIP interactions: 2 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:E.97, B:T.66, B:R.67, B:R.67 Water bridges: A:E.97, B:R.67 EDO.4: 3 residues within 4Å: Chain B: A.26, T.27, R.30 1 PLIP interactions: 1 interactions with chain B Water bridges: B:R.30 EDO.5: 5 residues within 4Å: Chain B: E.97, T.102, V.105 Chain C: T.66, R.67 6 PLIP interactions: 4 interactions with chain C, 2 interactions with chain B Hydrogen bonds: C:T.66, C:R.67, C:R.67, B:E.97 Water bridges: C:R.67, B:E.97 EDO.7: 3 residues within 4Å: Chain C: A.26, T.27, R.30 1 PLIP interactions: 1 interactions with chain C Water bridges: C:R.30 EDO.8: 5 residues within 4Å: Chain A: T.66, R.67 Chain C: E.97, T.102, V.105 6 PLIP interactions: 4 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:T.66, A:R.67, A:R.67, C:E.97 Water bridges: A:R.67, C:E.97

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 5 residues within 4Å: Chain A: S.65, R.67, T.68, H.143, R.301 Ligand excluded by PLIP CL.6: 5 residues within 4Å: Chain B: S.65, R.67, T.68, H.143, R.301 Ligand excluded by PLIP CL.9: 5 residues within 4Å: Chain C: S.65, R.67, T.68, H.143, R.301 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abendroth, J. et al., Crystal structure of Ornithine carbamoyltransferase from Brucella melitensis. To be Published

Release Date

2014-02-26

Peptides

Ornithine carbamoyltransferase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

Ornithine carbamoyltransferase

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