SMTL ID : 4ovi.1

Phenylacetone monooxygenase: oxidised enzyme in complex with APADP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.87 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 34 residues within 4Å: Chain A: V.22, G.23, G.25, F.26, S.27, I.45, E.46, T.47, G.52, G.53, V.54, W.55, W.57, N.58, C.65, D.66, I.67, Y.72, T.117, T.118, V.119, A.149, S.150, G.151, Q.152, L.153, S.154, F.389, I.399, N.445, M.446, I.450 Ligands: N01.2, CL.4 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:V.54, A:W.55, A:N.58, A:L.153, A:F.389 Hydrogen bonds: A:G.25, A:F.26, A:S.27, A:S.27, A:S.27, A:T.47, A:G.52, A:V.54, A:W.57, A:D.66, A:I.67, A:Y.72, A:Y.72, A:V.119, A:V.119, A:Q.152, A:M.446 Water bridges: A:A.24, A:G.28, A:T.47, A:G.53, A:G.151, A:Q.152, A:Q.152

1 x N01: 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE(Non-covalent)

N01.2: 26 residues within 4Å: Chain A: Y.60, R.64, D.66, L.153, P.159, N.160, F.161, I.192, G.193, T.194, G.195, S.196, S.197, Q.200, R.217, T.218, H.220, K.336, R.337, A.386, T.387, G.388, F.389, W.501 Ligands: FAD.1, CL.4 30 PLIP interactions: 30 interactions with chain A Hydrophobic interactions: A:D.66 Hydrogen bonds: A:N.160, A:T.194, A:G.195, A:S.197, A:Q.200, A:R.217, A:R.217, A:T.218, A:H.220 Water bridges: A:N.160, A:G.195, A:S.196, A:S.196, A:R.217, A:R.217, A:H.220, A:H.220, A:R.337, A:A.386, A:G.388, A:F.389, A:W.501, A:N.506 Salt bridges: A:R.217, A:H.220, A:H.220, A:K.336 pi-Cation interactions: A:R.217, A:R.217

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.3: 4 residues within 4Å: Chain A: Y.259, R.279, Y.280, E.283 1 PLIP interactions: 1 interactions with chain A Water bridges: A:R.279

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 3 residues within 4Å: Chain A: R.337 Ligands: FAD.1, N01.2 Ligand excluded by PLIP

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.5: 2 residues within 4Å: Chain A: R.350, D.351 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:D.351 Hydrogen bonds: A:D.351

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 3 residues within 4Å: Chain A: R.34, E.37, L.38 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martinoli, C. et al., Beyond the Protein Matrix: Probing Cofactor Variants in a Baeyer-Villiger Oxygenation Reaction. Acs Catalysis (2013)

Release Date

2014-05-28

Peptides

Phenylacetone monooxygenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phenylacetone monooxygenase

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