SMTL ID : 4pfd.2 (1 other biounit)

Crystal structure of M. tuberculosis in complex with a cBT - non-covalent adduct

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 33 residues within 4Å: Chain A: W.35, I.71, A.72, R.73, G.74, L.75, G.76, R.77, S.78, Y.79, N.82, A.83, M.93, A.113, P.135, G.136, T.137, V.140, T.141, G.143, G.144, A.147, C.148, I.150, H.151, N.197, G.198, G.201, I.202, I.203, Y.434, A.436 Ligands: 2R2.2 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:W.35, A:R.77, A:Y.79, A:T.137 Hydrogen bonds: A:G.74, A:L.75, A:G.76, A:R.77, A:S.78, A:N.82, A:N.82, A:G.136, A:T.141, A:H.151, A:H.151, A:I.203, A:I.203 Water bridges: A:G.143, A:G.143 pi-Cation interactions: A:K.437

1 x 2R2: [4-(2-methoxyethyl)piperazin-1-yl][6-methyl-7-nitro-5-(trifluoromethyl)-1,3-benzothiazol-2-yl]methanone(Non-covalent)

2R2.2: 16 residues within 4Å: Chain A: Y.79, G.136, H.151, G.152, K.153, S.247, Y.333, Q.355, L.382, V.384, K.386, N.404, C.406, D.408, K.437 Ligands: FAD.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.384, A:K.386 Hydrogen bonds: A:K.437 Salt bridges: A:D.408

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.3: 6 residues within 4Å: Chain A: L.134, P.135, G.136, T.137, R.138, L.329 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.135 pi-Stacking: A:Y.333

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Neres, J. et al., Crystal structure of M. tuberculosis in complex with a cBT. To be published

Release Date

2015-10-21

Peptides

Probable decaprenylphosphoryl-beta-D-ribose oxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Probable decaprenylphosphoryl-beta-D-ribose oxidase

Related Entries With Identical Sequence