SMTL ID : 4pmq.1

Crystal structure of the Mycobacterium tuberculosis Tat-secreted protein Rv2525c in complex with L-tartrate (orthorhombic crystal form)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

monomer

Ligands

3 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.1: 9 residues within 4Å: Chain A: A.11, Y.31, R.36, M.42, K.45, Q.67, K.70, D.193 Ligands: GOL.4 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Y.31, A:Y.31, A:K.45, A:K.70 Salt bridges: A:R.36, A:K.45, A:K.70, A:K.70 TLA.2: 4 residues within 4Å: Chain A: S.91, V.132, I.133, R.137 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.91, A:R.137, A:R.137 Salt bridges: A:R.137 TLA.3: 5 residues within 4Å: Chain A: R.36, P.37, G.38, G.39, A.40 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.38, A:G.39, A:A.40 Water bridges: A:G.38, A:W.41

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 10 residues within 4Å: Chain A: D.9, Y.31, C.65, Q.67, S.108, Y.141, W.160, Q.179, D.193 Ligands: TLA.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.31, A:S.108, A:Q.179, A:D.193

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bellinzoni, M. et al., Structural studies suggest a peptidoglycan hydrolase function for the Mycobacterium tuberculosis Tat-secreted protein Rv2525c. J.Struct.Biol. (2014)

Release Date

2014-10-08

Peptides

Tat-secreted protein Rv2525c: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tat-secreted protein Rv2525c

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