SMTL ID : 4ppa.3 (2 other biounits)

ITK kinase domain with compound 11 (N-[1-(3-CYANOBENZYL)-1H-PYRAZOL-4-YL]-6-(1H-PYRAZOL-4-YL)-1H-INDAZOLE-3-CARBOXAMIDE)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.67 Å

Oligo State

homo-dimer

Ligands

2 x 2VU: N-[1-(3-cyanobenzyl)-1H-pyrazol-4-yl]-6-(1H-pyrazol-4-yl)-1H-indazole-3-carboxamide(Non-covalent)

2VU.1: 17 residues within 4Å: Chain A: K.33, A.35, K.37, V.65, F.81, E.82, F.83, M.84, E.85, G.87, L.135, S.145, D.146 Chain B: Q.13, I.15, V.23, L.25 16 PLIP interactions: 12 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:A.35, A:F.83, A:L.135, A:L.135, B:I.15, B:V.23, B:V.23, B:L.25 Hydrogen bonds: A:K.33, A:K.37, A:E.82, A:M.84, A:M.84, A:G.87, A:D.146 pi-Stacking: A:F.81 2VU.2: 17 residues within 4Å: Chain A: Q.13, I.15, V.23, L.25 Chain B: K.33, A.35, K.37, V.65, F.81, E.82, F.83, M.84, E.85, G.87, L.135, S.145, D.146 14 PLIP interactions: 11 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:V.65, B:F.81, B:F.83, B:L.135, B:L.135, A:I.15, A:V.23, A:L.25 Hydrogen bonds: B:K.33, B:E.82, B:M.84, B:M.84, B:D.146 pi-Stacking: B:F.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pastor, R.M. et al., Discovery and optimization of indazoles as potent and selective interleukin-2 inducible T cell kinase (ITK) inhibitors. Bioorg.Med.Chem.Lett. (2014)

Release Date

2014-06-04

Peptides

Tyrosine-protein kinase ITK/TSK: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Tyrosine-protein kinase ITK/TSK

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