SMTL ID : 4pua.1

Crystal Structure Of glutathione transferase YghU from Streptococcus pneumoniae ATCC 700669, complexed with glutathione, Target EFI-507284

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

homo-dimer

Ligands

4 x GSH: GLUTATHIONE(Non-covalent)

GSH.1: 11 residues within 4Å: Chain A: F.20, N.24, N.52, K.98, A.152, P.153, G.156, G.157, W.213 Chain B: R.176 Ligands: GSH.2 10 PLIP interactions: 9 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:F.20, A:F.20 Hydrogen bonds: A:N.24, A:N.52, A:K.98, A:K.98 Water bridges: A:H.161, A:H.161 Salt bridges: A:H.161, B:R.176 GSH.2: 11 residues within 4Å: Chain A: T.50, N.52, I.80, Q.85, S.97, K.98, I.99, P.100, E.115, S.116 Ligands: GSH.1 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:N.52, A:Q.85, A:I.99, A:I.99, A:I.99, A:E.115, A:S.116 Water bridges: A:K.98, A:K.98, A:K.98, A:K.98, A:E.115, A:E.115, A:E.115, A:A.117, A:Q.148 Salt bridges: A:K.55, A:K.98 GSH.3: 11 residues within 4Å: Chain A: R.176 Chain B: F.20, N.24, N.52, K.98, A.152, P.153, G.156, G.157, W.213 Ligands: GSH.4 10 PLIP interactions: 9 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:F.20, B:F.20 Hydrogen bonds: B:N.24, B:N.52, B:K.98, B:K.98 Water bridges: B:H.161, B:H.161 Salt bridges: B:H.161, A:R.176 GSH.4: 11 residues within 4Å: Chain B: T.50, N.52, I.80, Q.85, S.97, K.98, I.99, P.100, E.115, S.116 Ligands: GSH.3 18 PLIP interactions: 18 interactions with chain B Hydrogen bonds: B:N.52, B:Q.85, B:I.99, B:I.99, B:I.99, B:E.115, B:S.116 Water bridges: B:K.98, B:K.98, B:K.98, B:K.98, B:E.115, B:E.115, B:E.115, B:A.117, B:Q.148 Salt bridges: B:K.55, B:K.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, J. et al., Crystal Structure Of glutathione transferase YghU from Streptococcus pneumoniae ATCC 700669, complexed with glutathione, Target EFI-507284. To be Published

Release Date

2014-04-09

Peptides

glutathione S-transferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

glutathione S-transferase