SMTL ID : 4pyt.1

Crystal structure of a MurB family EP-UDP-N-acetylglucosamine reductase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 33 residues within 4Å: Chain A: T.27, R.61, A.62, I.63, G.64, R.65, G.66, S.67, N.68, L.69, L.83, I.126, P.127, G.128, S.129, G.131, G.132, A.133, Y.135, M.136, A.138, G.139, A.140, R.174, G.184, I.185, C.186, R.212, C.222, A.223, G.224, F.261, E.297 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:P.127, A:F.261 Hydrogen bonds: A:R.61, A:G.64, A:R.65, A:G.66, A:S.67, A:S.67, A:N.68, A:S.129, A:G.132, A:G.139, A:G.139, A:C.186, A:C.186, A:R.212, A:R.212, A:E.297 Water bridges: A:A.62, A:S.129, A:R.174, A:R.174, A:R.174, A:R.174, A:Q.216, A:S.225

3 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.3: 1 residues within 4Å: Chain A: E.286 No protein-ligand interaction detected (PLIP) MG.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 3 residues within 4Å: Chain A: K.82, G.84, A.85 Ligand excluded by PLIP CL.6: 4 residues within 4Å: Chain A: N.220, S.255, E.256, V.263 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Auldridge, M.E. et al., LucY: A Versatile New Fluorescent Reporter Protein. Plos One (2015)

Release Date

2014-05-21

Peptides

UDP-N-acetylenolpyruvoylglucosamine reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-N-acetylenolpyruvoylglucosamine reductase