- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.88 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x IMP: INOSINIC ACID(Non-covalent)
- 4 x 2YA: 4-[(1R)-1-[1-(4-chlorophenyl)-1,2,3-triazol-4-yl]ethoxy]-1-oxidanyl-quinoline(Non-covalent)
2YA.2: 13 residues within 4Å:- Chain A: K.75, A.127, H.128, M.265, G.266, M.271, F.287, V.288, E.290
- Chain C: P.28, G.318, Y.319
- Ligands: IMP.1
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain C- Hydrophobic interactions: A:F.287, A:E.290, C:P.28, C:Y.319
- Hydrogen bonds: A:K.75
2YA.6: 12 residues within 4Å:- Chain A: P.28, S.315, G.318, Y.319
- Chain B: A.127, H.128, M.265, G.266, M.271, V.288, E.290
- Ligands: IMP.5
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:P.28, A:Y.319, B:A.127, B:E.290
2YA.13: 14 residues within 4Å:- Chain C: A.127, H.128, M.265, G.266, F.287, V.288, E.290
- Chain D: L.27, P.28, S.315, G.318, Y.319
- Ligands: IMP.12, FMT.14
4 PLIP interactions:2 interactions with chain C, 2 interactions with chain D- Hydrophobic interactions: C:A.127, D:L.27, D:Y.319
- Hydrogen bonds: C:E.290
2YA.16: 13 residues within 4Å:- Chain B: P.28, S.315, G.318, Y.319
- Chain D: A.127, H.128, T.184, M.265, G.266, M.271, V.288, E.290
- Ligands: IMP.15
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain D- Hydrophobic interactions: B:P.28, B:Y.319, D:A.127
- Water bridges: D:K.75
- 7 x FMT: FORMIC ACID(Non-functional Binders)
FMT.3: 6 residues within 4Å:- Chain A: T.35, K.206, G.231, C.233, L.325, E.326
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.206, A:K.206
FMT.7: 8 residues within 4Å:- Chain A: A.340, R.343
- Chain B: D.15, D.16, Q.337, T.338, S.339, F.342
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.343
FMT.9: 1 residues within 4Å:- Chain B: F.287
No protein-ligand interaction detected (PLIP)FMT.10: 3 residues within 4Å:- Chain B: A.156, V.192, D.200
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:D.200
FMT.14: 5 residues within 4Å:- Chain C: T.126, A.127, H.128, S.131
- Ligands: 2YA.13
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:T.126, C:A.127, C:H.128, C:S.131, C:S.131
FMT.17: 5 residues within 4Å:- Chain D: T.35, K.206, G.231, A.232, E.326
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:K.206, D:G.231, D:E.326
FMT.18: 3 residues within 4Å:- Chain D: A.156, P.158, D.200
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:A.156, D:D.200
- 1 x SO4: SULFATE ION(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.8: 9 residues within 4Å:- Chain B: T.35, K.206, L.228, G.231, A.232, C.233, L.325, E.326, Y.329
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:T.35, B:T.35, B:K.206, B:G.231, B:E.326
GOL.11: 7 residues within 4Å:- Chain B: K.219, Y.220, S.221, K.299, N.358, Y.359, S.360
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:S.221, B:S.221, B:K.299, B:K.299, B:S.360
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Maltseva, N. et al., Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and A110. TO BE PUBLISHED
- Release Date
- 2014-07-09
- Peptides
- Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
FC
GD
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.88 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x IMP: INOSINIC ACID(Non-covalent)
- 4 x 2YA: 4-[(1R)-1-[1-(4-chlorophenyl)-1,2,3-triazol-4-yl]ethoxy]-1-oxidanyl-quinoline(Non-covalent)
- 7 x FMT: FORMIC ACID(Non-functional Binders)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Maltseva, N. et al., Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and A110. TO BE PUBLISHED
- Release Date
- 2014-07-09
- Peptides
- Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
FC
GD
H