SMTL ID : 4q5r.2 (2 other biounits)

Crystal Structure of Glutathione S-transferase Bla g 5

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

3 x GSH: GLUTATHIONE(Non-covalent)

GSH.1: 12 residues within 4Å: Chain A: Y.9, L.15, W.40, K.44, G.50, K.51, T.52, P.53, Q.64, S.65 Chain B: D.98 Ligands: GSH.2 14 PLIP interactions: 13 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:L.15 Hydrogen bonds: A:T.52, A:T.52, A:Q.64, A:Q.64, A:S.65, A:R.100, B:D.98 Water bridges: A:T.52, A:V.66, A:V.66, A:R.100 Salt bridges: A:K.44, A:K.51 GSH.2: 3 residues within 4Å: Chain A: Y.108, Y.163 Ligands: GSH.1 1 PLIP interactions: 1 interactions with chain A Water bridges: A:R.100 GSH.4: 12 residues within 4Å: Chain A: D.98 Chain B: C.10, K.13, L.15, W.40, K.44, G.50, K.51, T.52, P.53, Q.64, S.65 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:L.15, B:K.51 Hydrogen bonds: B:K.13, B:T.52, B:T.52, B:Q.64, B:Q.64, B:Q.64, B:S.65 Water bridges: B:T.52, B:V.66, B:R.100, B:R.100 Salt bridges: B:K.44, B:K.51

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: K.44, F.49, G.50, K.51 Chain B: T.126, Y.129, Y.130 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:K.44, A:K.44, A:F.49, B:T.126 Water bridges: B:Y.130 GOL.5: 4 residues within 4Å: Chain A: Y.129 Chain B: K.44, F.49, G.50 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.44, B:F.49

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 5 residues within 4Å: Chain B: Y.9, C.10, A.14, G.16, R.20 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pedersen, L.C. et al., Crystal Structure of Glutathione S-transferase Bla g 5. To be Published

Release Date

2015-04-01

Peptides

Glutathione S-transferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Glutathione S-transferase

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