SMTL ID : 4q92.1 (2 other biounits)

1.90 Angstrom resolution crystal structure of apo betaine aldehyde dehydrogenase (betB) G234S mutant from Staphylococcus aureus (IDP00699) with BME-modified Cys289

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-tetramer

Ligands

6 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: G.307, A.312, F.413, G.414 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.414, A:G.414 Water bridges: A:V.416 NA.2: 3 residues within 4Å: Chain A: K.481, G.484 Chain B: V.270 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:V.270 NA.4: 3 residues within 4Å: Chain A: V.270 Chain B: K.481, G.484 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.484 NA.5: 3 residues within 4Å: Chain C: K.481, G.484 Chain D: V.270 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:K.481 NA.6: 4 residues within 4Å: Chain C: G.307, A.312, F.413, G.414 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:G.414, C:G.414 NA.8: 3 residues within 4Å: Chain C: V.270 Chain D: K.481, G.484 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:K.481

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 2 residues within 4Å: Chain A: D.102 Chain D: D.102 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain D Hydrogen bonds: A:D.102 Water bridges: D:D.102 PEG.7: 2 residues within 4Å: Chain B: D.102 Chain C: D.102 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Halavaty, A.S. et al., Structural and functional analysis of betaine aldehyde dehydrogenase from Staphylococcus aureus. Acta Crystallogr.,Sect.D (2015)

Release Date

2014-05-07

Peptides

Betaine aldehyde dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Betaine aldehyde dehydrogenase

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