SMTL ID : 4qe0.2 (1 other biounit)

Crystal structure of a DUF5043 family protein (BACUNI_01052) from Bacteroides uniformis ATCC 8492 at 1.85 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-tetramer

Ligands

16 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: G.28, Y.29, N.46, E.48, R.140, K.147 Ligand excluded by PLIP GOL.2: 7 residues within 4Å: Chain A: Q.82, D.85, F.86, K.175, L.176, P.177, P.178 Ligand excluded by PLIP GOL.3: 5 residues within 4Å: Chain A: D.27, G.28, Y.29, R.140 Chain B: K.102 Ligand excluded by PLIP GOL.4: 8 residues within 4Å: Chain A: I.56, Y.65, G.67, S.68, W.69, S.70, M.165 Chain C: S.68 Ligand excluded by PLIP GOL.5: 10 residues within 4Å: Chain A: W.69, S.70, S.71, Y.76 Chain C: W.69, S.70, S.71, I.74, Y.76 Ligands: GOL.15 Ligand excluded by PLIP GOL.6: 7 residues within 4Å: Chain A: G.174, K.175, L.176, P.177 Chain B: S.68, W.69, A.167 Ligand excluded by PLIP GOL.9: 5 residues within 4Å: Chain B: Y.29, N.46, E.48, R.140, K.147 Ligand excluded by PLIP GOL.10: 6 residues within 4Å: Chain B: S.81, A.84, D.85, F.152, L.166, W.168 Ligand excluded by PLIP GOL.11: 6 residues within 4Å: Chain C: G.28, Y.29, N.46, E.48, R.140, K.147 Ligand excluded by PLIP GOL.12: 7 residues within 4Å: Chain C: Q.82, D.85, F.86, K.175, L.176, P.177, P.178 Ligand excluded by PLIP GOL.13: 5 residues within 4Å: Chain C: D.27, G.28, Y.29, R.140 Chain D: K.102 Ligand excluded by PLIP GOL.14: 8 residues within 4Å: Chain A: S.68 Chain C: I.56, Y.65, G.67, S.68, W.69, S.70, M.165 Ligand excluded by PLIP GOL.15: 10 residues within 4Å: Chain A: W.69, S.70, S.71, I.74, Y.76 Chain C: W.69, S.70, S.71, Y.76 Ligands: GOL.5 Ligand excluded by PLIP GOL.16: 7 residues within 4Å: Chain C: G.174, K.175, L.176, P.177 Chain D: S.68, W.69, A.167 Ligand excluded by PLIP GOL.19: 5 residues within 4Å: Chain D: Y.29, N.46, E.48, R.140, K.147 Ligand excluded by PLIP GOL.20: 6 residues within 4Å: Chain D: S.81, A.84, D.85, F.152, L.166, W.168 Ligand excluded by PLIP

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.7: 3 residues within 4Å: Chain A: R.78, P.181, P.182 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.78, A:F.79, A:P.180 Salt bridges: A:R.78 SO4.8: 7 residues within 4Å: Chain A: W.69, S.71, N.72, E.156 Chain C: S.81, D.85, W.168 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:S.71, C:S.81, C:D.85 SO4.17: 3 residues within 4Å: Chain C: R.78, P.181, P.182 4 PLIP interactions: 4 interactions with chain C Water bridges: C:R.78, C:F.79, C:P.180 Salt bridges: C:R.78 SO4.18: 7 residues within 4Å: Chain A: S.81, D.85, W.168 Chain C: W.69, S.71, N.72, E.156 3 PLIP interactions: 1 interactions with chain C, 2 interactions with chain A Hydrogen bonds: C:S.71, A:S.81, A:D.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a hypothetical protein (BACUNI_01052) from Bacteroides uniformis ATCC 8492 at 1.85 A resolution. To be published

Release Date

2014-07-09

Peptides

hypothetical protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

hypothetical protein

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