SMTL ID : 4qey.10 (9 other biounits)

Crystal structure of a DUF4425 family protein (BACOVA_05332) from Bacteroides ovatus ATCC 8483 at 2.52 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.52 Å

Oligo State

monomer

Ligands

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 8 residues within 4Å: Chain A: Q.19, T.23, D.24, F.26, D.27, L.28, K.59, V.60 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.19, A:L.28

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: T.119, L.120, V.121, E.122 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.121, A:E.122, A:E.122 EDO.3: 2 residues within 4Å: Chain A: N.29, A.79 No protein-ligand interaction detected (PLIP) EDO.4: 6 residues within 4Å: Chain A: E.18, S.20, K.94, I.95, S.96, E.110 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.20, A:K.94, A:E.110 Water bridges: A:Q.19, A:K.111 EDO.5: 4 residues within 4Å: Chain A: T.10, G.11, K.71, D.102 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.102 EDO.6: 3 residues within 4Å: Chain A: K.14, Y.100, N.103 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.14, A:N.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a hypothetical protein (BACOVA_05332) from Bacteroides ovatus ATCC 8483 at 2.52 A resolution. To be published

Release Date

2014-07-16

Peptides

Uncharacterized protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
J

Uncharacterized protein

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