SMTL ID : 4qez.1 (1 other biounit)

Crystal structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Bacillus anthracis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

2 x ADE: ADENINE(Non-covalent)

ADE.1: 14 residues within 4Å: Chain A: S.76, A.77, G.78, F.152, M.153, V.172, E.173, M.174, S.197, D.198, A.200, S.204, F.208 Ligands: TRS.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.76, A:G.78, A:M.153, A:M.153, A:S.197 pi-Stacking: A:F.152, A:F.152 ADE.3: 13 residues within 4Å: Chain B: S.76, A.77, G.78, F.152, M.153, V.172, E.173, S.197, D.198, A.200, S.204, F.208 Ligands: TRS.4 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:S.76, B:G.78, B:M.153, B:M.153, B:S.197 pi-Stacking: B:F.152

2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.2: 11 residues within 4Å: Chain A: A.8, M.9, E.12, S.76, F.152, E.173, M.174, E.175, R.194, F.208 Ligands: ADE.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.12, A:S.76, A:M.174, A:R.194, A:R.194 TRS.4: 10 residues within 4Å: Chain B: A.8, M.9, E.12, S.76, E.173, M.174, E.175, R.194, F.208 Ligands: ADE.3 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:E.12, B:S.76, B:M.174, B:R.194, B:R.194

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tarique, K.F. et al., Crystal structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Bacillus anthracis. To be Published

Release Date

2014-06-18

Peptides

5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase

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