SMTL ID : 4qhg.1

Crystal structure of Methanocaldococcus jannaschii dimeric selecase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.69, E.70, H.73 Chain B: H.107 5 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: A:H.69, A:E.70, A:H.73, B:H.107, H2O.2 ZN.4: 4 residues within 4Å: Chain A: H.107 Chain B: H.69, E.70, H.73 5 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: B:H.69, B:E.70, B:H.73, A:H.107, H2O.3

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: A.39, I.66, L.99 Chain B: I.103, N.104, H.107 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.104 GOL.3: 2 residues within 4Å: Chain A: I.103 Ligands: GOL.6 No protein-ligand interaction detected (PLIP) GOL.5: 6 residues within 4Å: Chain A: I.103, N.104, H.107 Chain B: A.39, I.66, L.99 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.104 GOL.6: 2 residues within 4Å: Chain B: I.103 Ligands: GOL.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lopez-Pelegrin, M. et al., Multiple stable conformations account for reversible concentration-dependent oligomerization and autoinhibition of a metamorphic metallopeptidase. Angew.Chem.Int.Ed.Engl. (2014)

Release Date

2014-07-16

Peptides

Uncharacterized protein MJ1213: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Uncharacterized protein MJ1213

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