SMTL ID : 4qn2.1 (1 other biounit)

2.6 Angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betB) G234S mutant from Staphylococcus aureus (IDP00699) in complex with NAD+ and BME-free Cys289

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 29 residues within 4Å: Chain A: I.174, T.175, P.176, W.177, N.178, Q.183, K.201, P.202, S.203, E.204, G.234, S.235, G.238, D.239, F.252, T.253, G.254, S.255, T.258, H.261, I.262, E.276, L.277, G.278, C.310, E.411, F.413, L.439, W.477 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:T.253 Hydrogen bonds: A:T.175, A:W.177, A:K.201, A:E.204, A:G.234, A:D.239, A:D.239, A:S.255, A:S.255, A:S.255, A:T.258, A:T.258, A:E.276, A:L.277, A:E.411 Water bridges: A:W.177, A:I.256 NAD.2: 29 residues within 4Å: Chain B: I.174, T.175, P.176, W.177, N.178, Q.183, K.201, P.202, S.203, E.204, G.234, S.235, G.238, D.239, F.252, T.253, G.254, S.255, T.258, H.261, I.262, E.276, L.277, G.278, C.310, E.411, F.413, L.439, W.477 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:T.253 Hydrogen bonds: B:T.175, B:W.177, B:K.201, B:E.204, B:G.234, B:D.239, B:S.255, B:S.255, B:T.258, B:L.277, B:E.411 Water bridges: B:G.238 NAD.3: 28 residues within 4Å: Chain C: I.174, T.175, P.176, W.177, N.178, Q.183, K.201, P.202, S.203, E.204, G.234, G.238, D.239, F.252, T.253, G.254, S.255, T.258, H.261, I.262, E.276, L.277, G.278, C.310, E.411, F.413, L.439, W.477 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:T.253 Hydrogen bonds: C:T.175, C:W.177, C:K.201, C:E.204, C:G.234, C:D.239, C:S.255, C:S.255, C:T.258, C:L.277, C:E.411 Water bridges: C:I.256 NAD.4: 29 residues within 4Å: Chain D: I.174, T.175, P.176, W.177, N.178, Q.183, K.201, P.202, S.203, E.204, G.234, S.235, G.238, D.239, F.252, T.253, G.254, S.255, T.258, H.261, I.262, E.276, L.277, G.278, C.310, E.411, F.413, L.439, W.477 16 PLIP interactions: 16 interactions with chain D Hydrophobic interactions: D:T.253 Hydrogen bonds: D:T.175, D:W.177, D:K.201, D:E.204, D:G.234, D:D.239, D:D.239, D:S.255, D:S.255, D:T.258, D:T.258, D:E.276, D:L.277, D:E.411 Water bridges: D:I.256

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Halavaty, A.S. et al., Structural and functional analysis of betaine aldehyde dehydrogenase from Staphylococcus aureus. Acta Crystallogr.,Sect.D (2015)

Release Date

2014-07-02

Peptides

Betaine aldehyde dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

C
F

D
G

Betaine aldehyde dehydrogenase

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