SMTL ID : 4quw.2 (1 other biounit)

Crystal structure of the apo form of cyanobacterial aldehyde-deformylating oxygenase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

homo-dimer

Ligands

2 x PL3: HEXADECAN-1-OL(Non-covalent)

PL3.1: 19 residues within 4Å: Chain A: Y.21, I.24, I.27, V.28, G.31, E.32, A.35, E.60, F.87, Q.110, I.114, E.115, F.117, A.118, A.121, Y.122, Y.125, V.184, M.193 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.24, A:F.87, A:I.114, A:F.117, A:A.118, A:A.121, A:Y.125, A:Y.125, A:Y.125, A:Y.125, A:V.184 Hydrogen bonds: A:Q.110 PL3.2: 19 residues within 4Å: Chain B: Y.21, I.24, I.27, V.28, G.31, E.32, A.35, E.60, F.87, Q.110, I.114, E.115, F.117, A.118, A.121, Y.122, Y.125, V.184, M.193 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:I.24, B:F.87, B:I.114, B:F.117, B:A.118, B:A.121, B:Y.125, B:Y.125, B:Y.125, B:Y.125, B:V.184 Hydrogen bonds: B:Q.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jia, C. et al., Structural insights into the catalytic mechanism of aldehyde-deformylating oxygenases. Protein Cell (2015)

Release Date

2014-12-17

Peptides

Aldehyde decarbonylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Aldehyde decarbonylase

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