- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.85 Å
- Oligo State
- homo-octamer
- Ligands
- 4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 24 x GLY: GLYCINE(Non-covalent)
GLY.2: 3 residues within 4Å:- Chain A: D.35, P.51
- Ligands: GLY.3
3 PLIP interactions:2 Ligand-Ligand interactions, 1 interactions with chain A- Hydrogen bonds: G.2, G.3, A:D.35
GLY.3: 5 residues within 4Å:- Chain A: E.29, L.31, P.51, P.52
- Ligands: GLY.2
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Ligand interactions- Hydrogen bonds: A:E.29, A:E.29, G.2
GLY.4: 1 residues within 4Å:- Chain A: R.32
1 PLIP interactions:1 interactions with chain A- Water bridges: A:R.32
GLY.6: 3 residues within 4Å:- Chain B: D.35, P.51
- Ligands: GLY.7
3 PLIP interactions:2 Ligand-Ligand interactions, 1 interactions with chain B- Hydrogen bonds: G.6, G.7, B:D.35
GLY.7: 5 residues within 4Å:- Chain B: E.29, L.31, P.51, P.52
- Ligands: GLY.6
3 PLIP interactions:1 Ligand-Ligand interactions, 2 interactions with chain B- Hydrogen bonds: G.6, B:E.29, B:E.29
GLY.8: 1 residues within 4Å:- Chain B: R.32
1 PLIP interactions:1 interactions with chain B- Water bridges: B:R.32
GLY.10: 3 residues within 4Å:- Chain C: D.35, P.51
- Ligands: GLY.11
3 PLIP interactions:2 Ligand-Ligand interactions, 1 interactions with chain C- Hydrogen bonds: G.10, G.11, C:D.35
GLY.11: 5 residues within 4Å:- Chain C: E.29, L.31, P.51, P.52
- Ligands: GLY.10
3 PLIP interactions:1 Ligand-Ligand interactions, 2 interactions with chain C- Hydrogen bonds: G.10, C:E.29, C:E.29
GLY.12: 1 residues within 4Å:- Chain C: R.32
1 PLIP interactions:1 interactions with chain C- Water bridges: C:R.32
GLY.14: 3 residues within 4Å:- Chain D: D.35, P.51
- Ligands: GLY.15
3 PLIP interactions:2 Ligand-Ligand interactions, 1 interactions with chain D- Hydrogen bonds: G.14, G.15, D:D.35
GLY.15: 5 residues within 4Å:- Chain D: E.29, L.31, P.51, P.52
- Ligands: GLY.14
3 PLIP interactions:1 Ligand-Ligand interactions, 2 interactions with chain D- Hydrogen bonds: G.14, D:E.29, D:E.29
GLY.16: 1 residues within 4Å:- Chain D: R.32
1 PLIP interactions:1 interactions with chain D- Water bridges: D:R.32
GLY.17: 2 residues within 4Å:- Chain E: F.74, H.78
8 PLIP interactions:8 Ligand-Ligand interactions- Water bridges: G.23, G.23, G.23, G.23, G.23, G.23, G.26, G.26
GLY.18: 6 residues within 4Å:- Chain E: D.35, Y.38, F.39, T.50
- Chain G: P.52, K.59
3 PLIP interactions:1 interactions with chain G, 2 Ligand-Ligand interactions- Salt bridges: G:K.59
- Hydrogen bonds: G.18, G.18
GLY.19: 2 residues within 4Å:- Chain E: F.67
- Chain H: F.76
No protein-ligand interaction detected (PLIP)GLY.20: 2 residues within 4Å:- Chain F: F.74, H.78
8 PLIP interactions:8 Ligand-Ligand interactions- Water bridges: G.23, G.23, G.23, G.23, G.26, G.26, G.26, G.26
GLY.21: 6 residues within 4Å:- Chain F: D.35, Y.38, F.39, T.50
- Chain H: P.52, K.59
3 PLIP interactions:2 Ligand-Ligand interactions, 1 interactions with chain H- Hydrogen bonds: G.21, G.21
- Salt bridges: H:K.59
GLY.22: 2 residues within 4Å:- Chain F: F.67
- Chain G: F.76
No protein-ligand interaction detected (PLIP)GLY.23: 2 residues within 4Å:- Chain G: F.74, H.78
8 PLIP interactions:8 Ligand-Ligand interactions- Water bridges: G.17, G.17, G.17, G.17, G.20, G.20, G.20, G.20
GLY.24: 6 residues within 4Å:- Chain F: P.52, K.59
- Chain G: D.35, Y.38, F.39, T.50
3 PLIP interactions:1 interactions with chain F, 2 Ligand-Ligand interactions- Salt bridges: F:K.59
- Hydrogen bonds: G.24, G.24
GLY.25: 2 residues within 4Å:- Chain E: F.76
- Chain G: F.67
No protein-ligand interaction detected (PLIP)GLY.26: 2 residues within 4Å:- Chain H: F.74, H.78
8 PLIP interactions:8 Ligand-Ligand interactions- Water bridges: G.17, G.17, G.17, G.17, G.17, G.17, G.20, G.20
GLY.27: 6 residues within 4Å:- Chain E: P.52, K.59
- Chain H: D.35, Y.38, F.39, T.50
3 PLIP interactions:1 interactions with chain E, 2 Ligand-Ligand interactions- Salt bridges: E:K.59
- Hydrogen bonds: G.27, G.27
GLY.28: 2 residues within 4Å:- Chain F: F.76
- Chain H: F.67
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Napolitano, L.M. et al., A structural, functional, and computational analysis suggests pore flexibility as the base for the poor selectivity of CNG channels. Proc.Natl.Acad.Sci.USA (2015)
- Release Date
- 2015-07-01
- Peptides
- Potassium channel protein: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
BF
BG
BH
B - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.85 Å
- Oligo State
- homo-octamer
- Ligands
- 4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 24 x GLY: GLYCINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Napolitano, L.M. et al., A structural, functional, and computational analysis suggests pore flexibility as the base for the poor selectivity of CNG channels. Proc.Natl.Acad.Sci.USA (2015)
- Release Date
- 2015-07-01
- Peptides
- Potassium channel protein: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
BF
BG
BH
B - Membrane
-
We predict this structure to be a membrane protein.