SMTL ID : 4r6s.1 (1 other biounit)

Crystal structure of PPARgammma in complex with SR1663

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x 3K2: 4'-[(2,3-dimethyl-5-{[(1R)-1-(4-nitrophenyl)ethyl]carbamoyl}-1H-indol-1-yl)methyl]biphenyl-2-carboxylic acid(Non-covalent)

3K2.1: 18 residues within 4Å: Chain A: I.79, F.80, G.82, C.83, Q.84, R.86, S.87, A.90, I.124, Y.125, L.128, I.139, S.140, M.162, H.247, L.251, M.261, Y.271 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Q.84, A:R.86, A:R.86, A:A.90, A:I.124, A:I.139, A:L.251 Hydrogen bonds: A:S.87, A:S.87, A:Y.125, A:S.140 Water bridges: A:E.141 Salt bridges: A:R.86 3K2.2: 16 residues within 4Å: Chain B: I.79, F.80, C.83, Q.84, R.86, S.87, H.121, I.124, Y.125, L.128, I.139, S.140, M.162, K.165, H.247, L.251 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:R.86, B:I.124, B:I.124, B:L.128, B:I.139, B:L.251 Hydrogen bonds: B:S.87, B:S.87, B:S.140 Water bridges: B:E.141 Salt bridges: B:R.86 pi-Cation interactions: B:H.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Marciano, D.P. et al., Pharmacological repression of PPAR gamma promotes osteogenesis. Nat Commun (2015)

Release Date

2015-07-01

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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