- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 32 x GLY: GLYCINE(Non-covalent)(Non-functional Binders)
- 14 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.8: 2 residues within 4Å:- Chain A: P.33, I.34
No protein-ligand interaction detected (PLIP)MPD.9: 3 residues within 4Å:- Chain A: K.3, Q.8, F.11
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:F.11
- Hydrogen bonds: A:K.3, A:K.3
MPD.10: 4 residues within 4Å:- Chain A: F.57, F.61, L.64
- Ligands: GLY.3
2 PLIP interactions:1 interactions with chain A, 1 Ligand-Ligand interactions- Hydrophobic interactions: A:L.64
- Hydrogen bonds: G.3
MPD.23: 4 residues within 4Å:- Chain B: L.16, I.19, S.20
- Ligands: MPD.25
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:L.16
- Hydrogen bonds: B:L.16
MPD.24: 4 residues within 4Å:- Chain B: F.61, L.64, I.68
- Ligands: DMN.28
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:F.61, B:L.64
MPD.25: 3 residues within 4Å:- Chain B: S.20, I.23
- Ligands: MPD.23
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:I.23
MPD.26: 5 residues within 4Å:- Chain B: E.6, V.9
- Chain C: I.89, L.90, L.93
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain C- Hydrophobic interactions: B:E.6, B:E.6, B:V.9, C:L.93
MPD.47: 2 residues within 4Å:- Chain C: P.33, I.34
No protein-ligand interaction detected (PLIP)MPD.48: 3 residues within 4Å:- Chain C: K.3, Q.8, F.11
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:F.11
- Hydrogen bonds: C:K.3, C:K.3
MPD.49: 4 residues within 4Å:- Chain C: F.57, F.61, L.64
- Ligands: GLY.42
1 PLIP interactions:1 interactions with chain C- Hydrophobic interactions: C:L.64
MPD.62: 4 residues within 4Å:- Chain D: L.16, I.19, S.20
- Ligands: MPD.64
2 PLIP interactions:2 interactions with chain D- Hydrophobic interactions: D:L.16
- Hydrogen bonds: D:L.16
MPD.63: 4 residues within 4Å:- Chain D: F.61, L.64, I.68
- Ligands: DMN.67
2 PLIP interactions:2 interactions with chain D- Hydrophobic interactions: D:F.61, D:L.64
MPD.64: 3 residues within 4Å:- Chain D: S.20, I.23
- Ligands: MPD.62
1 PLIP interactions:1 interactions with chain D- Hydrophobic interactions: D:I.23
MPD.65: 5 residues within 4Å:- Chain A: I.89, L.90, L.93
- Chain D: E.6, V.9
4 PLIP interactions:3 interactions with chain D, 1 interactions with chain A- Hydrophobic interactions: D:E.6, D:E.6, D:V.9, A:L.93
- 32 x DMN: DIMETHYLAMINE(Non-covalent)(Non-functional Binders)
DMN.11: 1 residues within 4Å:- Chain A: S.20
Ligand excluded by PLIPDMN.12: 1 residues within 4Å:- Chain A: A.81
Ligand excluded by PLIPDMN.13: 13 residues within 4Å:- Chain A: T.46, V.47, G.48
- Chain B: T.46, V.47, G.48
- Chain C: T.46, V.47, G.48
- Chain D: T.46, V.47, G.48
- Ligands: DMN.52
Ligand excluded by PLIPDMN.27: 4 residues within 4Å:- Chain B: D.4, K.5, E.6, K.79
Ligand excluded by PLIPDMN.28: 2 residues within 4Å:- Chain B: S.20
- Ligands: MPD.24
Ligand excluded by PLIPDMN.29: 2 residues within 4Å:- Chain B: I.68
- Chain C: Q.85
Ligand excluded by PLIPDMN.30: 4 residues within 4Å:- Chain B: D.35, F.39, T.50, P.51
Ligand excluded by PLIPDMN.31: 1 residues within 4Å:- Chain B: R.32
Ligand excluded by PLIPDMN.32: 1 residues within 4Å:- Ligands: DMN.33
Ligand excluded by PLIPDMN.33: 3 residues within 4Å:- Chain B: T.27
- Ligands: DMN.32, DMN.35
Ligand excluded by PLIPDMN.34: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPDMN.35: 1 residues within 4Å:- Ligands: DMN.33
Ligand excluded by PLIPDMN.36: 3 residues within 4Å:- Chain B: P.52, P.53, Q.54
Ligand excluded by PLIPDMN.37: 1 residues within 4Å:- Chain B: I.60
Ligand excluded by PLIPDMN.38: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPDMN.39: 1 residues within 4Å:- Chain B: Q.85
Ligand excluded by PLIPDMN.50: 1 residues within 4Å:- Chain C: S.20
Ligand excluded by PLIPDMN.51: 1 residues within 4Å:- Chain C: A.81
Ligand excluded by PLIPDMN.52: 13 residues within 4Å:- Chain A: T.46, V.47, G.48
- Chain B: T.46, V.47, G.48
- Chain C: T.46, V.47, G.48
- Chain D: T.46, V.47, G.48
- Ligands: DMN.13
Ligand excluded by PLIPDMN.66: 4 residues within 4Å:- Chain D: D.4, K.5, E.6, K.79
Ligand excluded by PLIPDMN.67: 2 residues within 4Å:- Chain D: S.20
- Ligands: MPD.63
Ligand excluded by PLIPDMN.68: 2 residues within 4Å:- Chain A: Q.85
- Chain D: I.68
Ligand excluded by PLIPDMN.69: 4 residues within 4Å:- Chain D: D.35, F.39, T.50, P.51
Ligand excluded by PLIPDMN.70: 1 residues within 4Å:- Chain D: R.32
Ligand excluded by PLIPDMN.71: 1 residues within 4Å:- Ligands: DMN.72
Ligand excluded by PLIPDMN.72: 3 residues within 4Å:- Chain D: T.27
- Ligands: DMN.71, DMN.74
Ligand excluded by PLIPDMN.73: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPDMN.74: 1 residues within 4Å:- Ligands: DMN.72
Ligand excluded by PLIPDMN.75: 3 residues within 4Å:- Chain D: P.52, P.53, Q.54
Ligand excluded by PLIPDMN.76: 1 residues within 4Å:- Chain D: I.60
Ligand excluded by PLIPDMN.77: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPDMN.78: 1 residues within 4Å:- Chain D: Q.85
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Napolitano, L.M. et al., A structural, functional, and computational analysis suggests pore flexibility as the base for the poor selectivity of CNG channels. Proc.Natl.Acad.Sci.USA (2015)
- Release Date
- 2015-07-01
- Peptides
- Potassium channel protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 32 x GLY: GLYCINE(Non-covalent)(Non-functional Binders)
- 14 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 32 x DMN: DIMETHYLAMINE(Non-covalent)(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Napolitano, L.M. et al., A structural, functional, and computational analysis suggests pore flexibility as the base for the poor selectivity of CNG channels. Proc.Natl.Acad.Sci.USA (2015)
- Release Date
- 2015-07-01
- Peptides
- Potassium channel protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B - Membrane
-
We predict this structure to be a membrane protein.