SMTL ID : 4r84.2 (3 other biounits)

Crystal structure of Sialyltransferase from Photobacterium damsela with CMP-3F(a)Neu5Ac bound

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x CSF: CYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACID(Non-covalent)

CSF.1: 17 residues within 4Å: Chain A: S.128, R.156, T.362, G.363, K.405, G.406, H.407, P.408, I.431, S.432, F.433, E.434, I.449, A.450, S.451, S.452, L.453 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:L.453 Hydrogen bonds: A:S.128, A:R.156, A:G.363, A:G.363, A:F.433, A:E.434, A:E.434, A:S.452 Water bridges: A:T.362, A:T.364, A:T.364, A:K.405, A:S.451, A:V.466, A:T.468 Salt bridges: A:H.407

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: Y.351, S.354, L.356, N.358, D.401 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.354, A:L.356, A:D.401, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huynh, N. et al., Crystal structures of sialyltransferase from Photobacterium damselae. Febs Lett. (2014)

Release Date

2014-12-03

Peptides

Sialyltransferase 0160: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Sialyltransferase 0160

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