SMTL ID : 4ra3.1 (1 other biounit)

Crystal structure of dimeric S33C beta-2 microglobulin mutant in complex with Thioflavin (ThT) at 2.8 Angstrom resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

3 x TFX: 2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium(Non-covalent)

TFX.1: 5 residues within 4Å: Chain A: Y.27, S.53, S.56, S.58, Y.64 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.64, A:Y.64 pi-Stacking: A:Y.64 TFX.2: 2 residues within 4Å: Chain A: Q.9, Y.11 1 PLIP interactions: 1 interactions with chain A pi-Stacking: A:Y.11 TFX.3: 7 residues within 4Å: Chain B: Q.9, Y.11, S.12, R.13, H.14, P.15, M.100 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:Y.11, B:P.15 pi-Stacking: B:Y.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Halabelian, L. et al., A covalent homodimer probing early oligomers along amyloid aggregation. Sci Rep (2015)

Release Date

2015-09-09

Peptides

Beta-2-microglobulin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Beta-2-microglobulin

Related Entries With Identical Sequence