- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.31 Å
- Oligo State
- homo-tetramer
- Ligands
- 16 x NA: SODIUM ION(Non-functional Binders)
- 8 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.5: 6 residues within 4Å:- Chain A: L.31, D.35, Y.38, T.50, P.51
- Chain D: P.52
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain D- Hydrophobic interactions: A:Y.38, A:T.50, D:P.52
MPD.6: 5 residues within 4Å:- Chain A: I.15, I.19, L.37
- Ligands: GLY.9, GLY.35
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:I.15, A:I.19, A:L.37
MPD.14: 6 residues within 4Å:- Chain B: L.31, D.35, Y.38, T.50, P.51
- Chain C: P.52
3 PLIP interactions:1 interactions with chain C, 2 interactions with chain B- Hydrophobic interactions: C:P.52, B:Y.38, B:T.50
MPD.15: 5 residues within 4Å:- Chain B: I.15, I.19, L.37
- Ligands: GLY.18, GLY.26
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:I.15, B:I.19, B:L.37
MPD.23: 6 residues within 4Å:- Chain A: P.52
- Chain C: L.31, D.35, Y.38, T.50, P.51
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain A- Hydrophobic interactions: C:Y.38, C:T.50, A:P.52
MPD.24: 5 residues within 4Å:- Chain C: I.15, I.19, L.37
- Ligands: GLY.8, GLY.27
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:I.15, C:I.19, C:L.37
MPD.32: 6 residues within 4Å:- Chain B: P.52
- Chain D: L.31, D.35, Y.38, T.50, P.51
3 PLIP interactions:2 interactions with chain D, 1 interactions with chain B- Hydrophobic interactions: D:Y.38, D:T.50, B:P.52
MPD.33: 5 residues within 4Å:- Chain D: I.15, I.19, L.37
- Ligands: GLY.17, GLY.36
3 PLIP interactions:3 interactions with chain D- Hydrophobic interactions: D:I.15, D:I.19, D:L.37
- 12 x GLY: GLYCINE(Non-covalent)
GLY.7: 6 residues within 4Å:- Chain A: E.29, L.31, F.39, P.51, P.52, Q.54
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.29, A:P.51, A:P.52
GLY.8: 4 residues within 4Å:- Chain A: L.64
- Chain C: F.11, F.76
- Ligands: MPD.24
No protein-ligand interaction detected (PLIP)GLY.9: 3 residues within 4Å:- Chain A: I.34, L.37
- Ligands: MPD.6
No protein-ligand interaction detected (PLIP)GLY.16: 6 residues within 4Å:- Chain B: E.29, L.31, F.39, P.51, P.52, Q.54
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:E.29, B:P.51, B:P.52
GLY.17: 4 residues within 4Å:- Chain B: L.64
- Chain D: F.11, F.76
- Ligands: MPD.33
No protein-ligand interaction detected (PLIP)GLY.18: 3 residues within 4Å:- Chain B: I.34, L.37
- Ligands: MPD.15
No protein-ligand interaction detected (PLIP)GLY.25: 6 residues within 4Å:- Chain C: E.29, L.31, F.39, P.51, P.52, Q.54
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:E.29, C:P.51, C:P.52
GLY.26: 4 residues within 4Å:- Chain B: F.11, F.76
- Chain C: L.64
- Ligands: MPD.15
No protein-ligand interaction detected (PLIP)GLY.27: 3 residues within 4Å:- Chain C: I.34, L.37
- Ligands: MPD.24
No protein-ligand interaction detected (PLIP)GLY.34: 6 residues within 4Å:- Chain D: E.29, L.31, F.39, P.51, P.52, Q.54
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:E.29, D:P.51, D:P.52
GLY.35: 4 residues within 4Å:- Chain A: F.11, F.76
- Chain D: L.64
- Ligands: MPD.6
No protein-ligand interaction detected (PLIP)GLY.36: 3 residues within 4Å:- Chain D: I.34, L.37
- Ligands: MPD.33
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Napolitano, L.M. et al., A structural, functional, and computational analysis suggests pore flexibility as the base for the poor selectivity of CNG channels. Proc.Natl.Acad.Sci.USA (2015)
- Release Date
- 2015-07-01
- Peptides
- Potassium channel protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.31 Å
- Oligo State
- homo-tetramer
- Ligands
- 16 x NA: SODIUM ION(Non-functional Binders)
- 8 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 12 x GLY: GLYCINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Napolitano, L.M. et al., A structural, functional, and computational analysis suggests pore flexibility as the base for the poor selectivity of CNG channels. Proc.Natl.Acad.Sci.USA (2015)
- Release Date
- 2015-07-01
- Peptides
- Potassium channel protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A - Membrane
-
We predict this structure to be a membrane protein.