- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.35 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x CO: COBALT (II) ION(Non-covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 2 residues within 4Å:- Chain A: D.229, P.233
No protein-ligand interaction detected (PLIP)GOL.4: 5 residues within 4Å:- Chain A: F.106, K.109, N.110
- Chain B: W.265, Y.266
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.110
GOL.5: 2 residues within 4Å:- Chain A: R.247, W.249
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.247
- Water bridges: A:Q.252
GOL.6: 1 residues within 4Å:- Chain A: D.235
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.235
GOL.12: 2 residues within 4Å:- Chain B: D.229, P.233
No protein-ligand interaction detected (PLIP)GOL.13: 5 residues within 4Å:- Chain A: W.265, Y.266
- Chain B: F.106, K.109, N.110
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain B- Water bridges: A:Y.101
- Hydrogen bonds: B:N.110
GOL.14: 2 residues within 4Å:- Chain B: R.247, W.249
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:R.247
- Water bridges: B:Q.252
GOL.15: 1 residues within 4Å:- Chain B: D.235
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:D.235, B:D.235
- 2 x MYR: MYRISTIC ACID(Non-covalent)
MYR.7: 13 residues within 4Å:- Chain A: H.26, Y.99, K.139, H.172, H.201, R.225, I.230, Y.231, D.258, I.263, Y.266
- Ligands: CO.1, CO.2
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:I.230, A:I.263, A:Y.266, A:Y.266
- Hydrogen bonds: A:Y.99
- Water bridges: A:R.225
- Salt bridges: A:H.26, A:H.172, A:H.201, A:R.225
MYR.16: 13 residues within 4Å:- Chain B: H.26, Y.99, K.139, H.172, H.201, R.225, I.230, Y.231, D.258, I.263, Y.266
- Ligands: CO.10, CO.11
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:I.230, B:I.263, B:Y.266, B:Y.266
- Water bridges: B:R.225
- Salt bridges: B:H.26, B:H.172, B:H.201, B:R.225
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.8: 3 residues within 4Å:- Chain A: S.209, E.212, R.216
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.212, A:E.212
- Salt bridges: A:R.216
SO4.9: 6 residues within 4Å:- Chain A: H.162, I.163, D.166, G.191, V.192, D.193
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.193
- Salt bridges: A:H.162
SO4.17: 3 residues within 4Å:- Chain B: S.209, E.212, R.216
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.212
- Salt bridges: B:R.216
SO4.18: 6 residues within 4Å:- Chain B: H.162, I.163, D.166, G.191, V.192, D.193
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:D.193
- Salt bridges: B:H.162
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hiblot, J. et al., Crystal structure of VmoLac, a tentative quorum quenching lactonase from the extremophilic crenarchaeon Vulcanisaeta moutnovskia. Sci Rep (2015)
- Release Date
- 2015-02-25
- Peptides
- Parathion hydrolase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.35 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x CO: COBALT (II) ION(Non-covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- 2 x MYR: MYRISTIC ACID(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hiblot, J. et al., Crystal structure of VmoLac, a tentative quorum quenching lactonase from the extremophilic crenarchaeon Vulcanisaeta moutnovskia. Sci Rep (2015)
- Release Date
- 2015-02-25
- Peptides
- Parathion hydrolase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A