SMTL ID : 4ree.3 (2 other biounits)

Crystal Structure of TR3 LBD in complex with Molecule 6

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.37 Å

Oligo State

homo-dimer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: H.22, S.25, G.26, P.27, R.100, R.104 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.100, A:R.104 Water bridges: A:L.23, A:P.27, A:P.27 GOL.2: 2 residues within 4Å: Chain A: E.170, R.173 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.173 GOL.3: 7 residues within 4Å: Chain B: H.22, L.23, S.25, G.26, P.27, R.100, R.104 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.100, B:R.104, B:R.104

1 x 3MZ: 1-(2,3,4-trihydroxyphenyl)nonan-1-one(Covalent)

3MZ.4: 13 residues within 4Å: Chain B: L.99, F.139, L.156, L.159, V.160, I.162, T.163, Q.178, L.205, L.206, K.208, L.209, L.212 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:L.99, B:F.139, B:L.156, B:V.160, B:L.205, B:K.208, B:L.212 Hydrogen bonds: B:T.163, B:Q.178 Water bridges: B:D.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, W.J. et al., Induction of Autophagic Death in Cancer Cells by Agonizing TR3 and Attenuating Akt2 Activity. Chem.Biol. (2015)

Release Date

2015-09-09

Peptides

Nuclear receptor subfamily 4 group A member 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Nuclear receptor subfamily 4 group A member 1

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