- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 1 x B12: COBALAMIN(Non-covalent)
- 1 x SCA: SUCCINYL-COENZYME A(Non-covalent)
SCA.2: 32 residues within 4Å:- Chain A: Y.74, T.76, M.77, F.80, R.81, T.84, R.86, Y.88, S.113, S.161, S.163, T.165, T.194, Q.196, R.206, N.235, Y.242, H.243, R.282, S.284, F.286, R.325, T.326, H.327, Q.329, Q.360, S.361
- Chain B: V.41, R.44
- Ligands: B12.1, 5AD.3, MCA.4
41 PLIP interactions:39 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:Y.242, A:F.286, A:R.325
- Hydrogen bonds: A:Y.74, A:T.76, A:T.76, A:M.77, A:R.81, A:Y.88, A:Y.88, A:S.113, A:S.161, A:S.163, A:T.165, A:T.194, A:Q.196, A:S.284, A:S.361, B:R.44, B:R.44
- Water bridges: A:Y.74, A:T.76, A:R.86, A:S.163, A:N.235, A:N.235, A:N.235, A:N.235, A:R.282, A:R.282, A:S.284, A:K.320, A:K.320, A:K.320, A:R.325, A:R.325
- Salt bridges: A:R.86, A:R.206, A:H.243, A:R.282
- pi-Cation interactions: A:R.81
- 1 x 5AD: 5'-DEOXYADENOSINE(Non-covalent)
- 1 x MCA: METHYLMALONYL-COENZYME A(Non-covalent)
MCA.4: 31 residues within 4Å:- Chain A: Y.74, T.76, M.77, F.80, R.81, T.84, R.86, Y.88, S.113, S.163, T.165, T.194, Q.196, R.206, N.235, Y.242, H.243, R.282, S.284, F.286, R.325, T.326, H.327, Q.329, Q.360, S.361
- Chain B: V.41, R.44
- Ligands: B12.1, SCA.2, 5AD.3
39 PLIP interactions:37 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:Y.88, A:Y.242, A:H.327
- Hydrogen bonds: A:Y.74, A:T.76, A:T.76, A:R.81, A:R.86, A:Y.88, A:Y.88, A:S.113, A:S.161, A:S.163, A:T.194, A:Q.196, A:S.284, A:S.361, B:R.44, B:R.44
- Water bridges: A:Y.74, A:Y.74, A:T.76, A:S.163, A:N.235, A:N.235, A:N.235, A:N.235, A:N.235, A:N.235, A:S.284, A:K.320, A:K.320, A:R.325, A:R.325
- Salt bridges: A:R.86, A:R.206, A:H.243, A:R.282
- pi-Cation interactions: A:R.81
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 5 residues within 4Å:- Chain A: A.40, E.41, T.250, N.292, E.296
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:E.41, A:E.296
- Water bridges: A:E.41, A:M.291, A:N.292, A:E.296
GOL.6: 8 residues within 4Å:- Chain B: F.92, T.96, R.231, D.315, K.316, R.317, G.318, R.320
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:R.231, B:D.315, B:K.316, B:G.318, B:R.320, B:R.320
- Water bridges: B:R.320
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mancia, F. et al., Conformational changes on substrate binding to methylmalonyl CoA mutase and new insights into the free radical mechanism. Structure (1998)
- Release Date
- 1999-01-13
- Peptides
- METHYLMALONYL-COA MUTASE: A
METHYLMALONYL-COA MUTASE: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 1 x B12: COBALAMIN(Non-covalent)
- 1 x SCA: SUCCINYL-COENZYME A(Non-covalent)
- 1 x 5AD: 5'-DEOXYADENOSINE(Non-covalent)
- 1 x MCA: METHYLMALONYL-COENZYME A(Non-covalent)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mancia, F. et al., Conformational changes on substrate binding to methylmalonyl CoA mutase and new insights into the free radical mechanism. Structure (1998)
- Release Date
- 1999-01-13
- Peptides
- METHYLMALONYL-COA MUTASE: A
METHYLMALONYL-COA MUTASE: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D