SMTL ID : 4rgb.1

Crystal structure of a putative carveol dehydrogenase from Mycobacterium avium bound to NAD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 30 residues within 4Å: Chain A: G.32, A.34, R.35, G.36, Q.37, D.56, I.57, L.68, G.69, A.93, D.94, V.95, N.121, A.122, G.123, V.124, I.144, T.172, S.173, S.174, Y.191, K.195, P.221, T.222, N.223, C.224, T.226, P.227, M.228, I.229 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:P.221 Hydrogen bonds: A:R.35, A:Q.37, A:Q.37, A:I.57, A:G.69, A:D.94, A:V.95, A:N.121, A:G.123, A:Y.191, A:K.195, A:C.224, A:C.224, A:T.226, A:M.228 Water bridges: A:G.38, A:Y.66, A:N.121 Salt bridges: A:R.35 NAD.2: 30 residues within 4Å: Chain B: G.32, A.34, R.35, G.36, Q.37, D.56, I.57, L.68, G.69, A.93, D.94, V.95, N.121, A.122, G.123, V.124, I.144, T.172, S.173, S.174, Y.191, K.195, P.221, T.222, N.223, C.224, T.226, P.227, M.228, I.229 18 PLIP interactions: 18 interactions with chain B Hydrophobic interactions: B:P.221 Hydrogen bonds: B:R.35, B:Q.37, B:Q.37, B:I.57, B:G.69, B:D.94, B:V.95, B:N.121, B:G.123, B:K.195, B:C.224, B:C.224, B:T.226 Water bridges: B:G.38, B:Y.66, B:N.121 Salt bridges: B:R.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Haft, D.H. et al., Mycofactocin-associated mycobacterial dehydrogenases with non-exchangeable NAD cofactors. Sci Rep (2017)

Release Date

2014-10-15

Peptides

Carveol dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Carveol dehydrogenase