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SMTL ID : 4rqs.1 (1 other biounit)

Crystal structure of fully glycosylated HIV-1 gp120 core bound to CD4 and 17b Fab

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 4.49 Å
Oligo State
hetero-1-1-1-1-mer
Ligands
1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Kong, L. et al., Crystal structure of a fully glycosylated HIV-1 gp120 core reveals a stabilizing role for the glycan at Asn262. Proteins (2015)
Release Date
2014-12-31
Peptides
2-domain CD4: A
17b Fab Light Chain: B
17b Fab Heavy Chain: C
HIV-1 YU2 gp120 core chimeric protein: D
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
B
B
C
C
D
D
G

2-domain CD4

17b Fab Light Chain

17b Fab Heavy Chain

HIV-1 YU2 gp120 core chimeric protein

Related Entries With Identical Sequence

1g9m.1 | 1g9n.1 | 1gc1.1 | 1rz8.1 | 1rz8.2 | 1rzj.1 | 1rzk.1 | 1yyl.1 | 1yyl.2 | 1yym.1 | 1yym.2 | 2i5y.1 | 2i5y.2 | 2i60.1 | 2i60.2 | 2nxy.1 | 2nxz.1 | 2ny0.1 | 2ny1.1 | 2ny2.1 | 2ny3.1 | 2ny4.1 | 2ny5.1 | 2ny6.1 | 3j70.1 | 4h8w.1 | 4jm2.1 | 4rqs.2 | 5a7x.1 | 5a8h.1  more...