SMTL ID : 4rvp.1

Crystal structure of superoxide dismutase from sedum alfredii

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-hexamer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.67, H.75, H.84, D.87, S.140 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.67, A:H.75, A:H.84, A:D.87, A:D.87 ZN.2: 5 residues within 4Å: Chain B: H.67, H.75, H.84, D.87, S.140 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:H.67, B:H.75, B:H.84, B:D.87, B:D.87 ZN.3: 4 residues within 4Å: Chain C: H.67, H.75, H.84, D.87 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:H.67, C:H.75, C:D.87, C:D.87 ZN.4: 5 residues within 4Å: Chain D: H.67, H.75, H.84, D.87, S.140 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:H.67, D:H.75, D:H.84, D:D.87, D:D.87 ZN.5: 5 residues within 4Å: Chain E: H.67, H.75, H.84, D.87, S.140 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:H.67, E:H.75, E:H.84, E:D.87 ZN.6: 5 residues within 4Å: Chain F: H.67, H.75, H.84, D.87, S.140 5 PLIP interactions: 5 interactions with chain F Metal complexes: F:H.67, F:H.75, F:H.84, F:D.87, F:D.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qiu, R. et al., The positive effects of Cd and Cd-Zn relationship in the Zn-related physiological processes involved in growth in the Zn/Cd hyperaccumulator Sedum alfredii. To be Published

Release Date

2015-12-16

Peptides

superoxide dismutase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

superoxide dismutase