SMTL ID : 4rvq.1

PWI-like domain of Chaetomium thermophilum Brr2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.13 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: L.63, E.87, R.89 3 PLIP interactions: 3 interactions with chain A Water bridges: A:E.87, A:E.87 Salt bridges: A:R.89 SO4.2: 1 residues within 4Å: Chain A: A.35 3 PLIP interactions: 3 interactions with chain A Water bridges: A:A.35, A:A.35, A:A.35 SO4.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) SO4.4: 2 residues within 4Å: Chain A: R.17, E.18 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.17, A:R.17, A:E.18

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 6 residues within 4Å: Chain A: S.50, E.52, V.93, W.94, R.97 Ligands: EDO.6 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.52, A:R.97 EDO.6: 9 residues within 4Å: Chain A: L.49, S.50, E.52, D.90, V.93, W.94, E.117, L.119 Ligands: EDO.5 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.50, A:D.90, A:W.94 EDO.7: 3 residues within 4Å: Chain A: Q.62, L.63, R.64 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.63, A:R.64 Water bridges: A:R.64 EDO.8: 5 residues within 4Å: Chain A: D.10, N.12, Y.13, E.87, N.88 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.10 Water bridges: A:E.87, A:N.88, A:K.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Absmeier, E. et al., A noncanonical PWI domain in the N-terminal helicase-associated region of the spliceosomal Brr2 protein. Acta Crystallogr.,Sect.D (2015)

Release Date

2015-04-01

Peptides

Pre-mRNA splicing helicase-like protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pre-mRNA splicing helicase-like protein