SMTL ID : 4rys.1

Crystal structure of the green fluorescent rotein NowGFP (the variant of cyan Cerulean) at pH 4.8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.18 Å

Oligo State

monomer

Ligands

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: L.65, V.67, P.68, W.69, P.70, H.149, Y.153 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:L.65, A:W.69, A:H.149 Water bridges: A:H.149, A:L.151 GOL.2: 8 residues within 4Å: Chain A: K.111, D.112, D.113, K.141, G.144, N.145, I.146, L.187 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.145, A:I.146 Water bridges: A:K.141 GOL.3: 5 residues within 4Å: Chain A: R.119, E.121, R.132, E.134 Ligands: GOL.5 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.119, A:R.119, A:E.134 Water bridges: A:E.121, A:R.132 GOL.4: 5 residues within 4Å: Chain A: A.155, I.156, S.157, I.177, R.178 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.155, A:S.157, A:T.176, A:R.178 GOL.5: 6 residues within 4Å: Chain A: E.29, L.30, D.31, R.132, I.133 Ligands: GOL.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.31, A:I.133, A:I.133 GOL.6: 1 residues within 4Å: Chain A: D.183 2 PLIP interactions: 2 interactions with chain A Water bridges: A:D.183, A:D.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pletnev, V.Z. et al., Structure of the green fluorescent protein NowGFP with an anionic tryptophan-based chromophore. Acta Crystallogr.,Sect.D (2015)

Release Date

2015-09-02

Peptides

NowGFP: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NowGFP