SMTL ID : 4s2r.1

Crystal structure of X-prolyl aminopeptidase from Caenorhabditis elegans: a cytosolic enzyme with a di-nuclear active site

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: D.447, H.510, E.545, E.559 Ligands: ZN.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.447, A:H.510, A:E.545, A:E.559 ZN.2: 6 residues within 4Å: Chain A: F.401, D.436, D.447, T.449, E.559 Ligands: ZN.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.436, A:D.447, A:D.447, A:E.559 ZN.3: 6 residues within 4Å: Chain B: F.401, D.436, D.447, T.449, E.559 Ligands: ZN.4 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.436, B:D.436, B:D.447, B:E.559 ZN.4: 6 residues within 4Å: Chain B: D.447, H.510, T.543, E.545, E.559 Ligands: ZN.3 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.447, B:H.510, B:E.545, B:E.559

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iyer, S. et al., Crystal structure of X-prolyl aminopeptidase from Caenorhabditis elegans: A cytosolic enzyme with a di-nuclear active site. FEBS Open Bio (2015)

Release Date

2015-04-22

Peptides

Protein APP-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
P

B
Q

Protein APP-1

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