SMTL ID : 4tlv.1 (5 other biounits)

CARDS TOXIN, NICKED

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.8, F.9, R.147 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.8, A:R.147 SO4.2: 2 residues within 4Å: Chain A: K.253, S.267 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.267, A:S.267 Salt bridges: A:K.253

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: Y.265, V.269, L.272, R.435, A.436, A.437, S.438 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.436 GOL.4: 4 residues within 4Å: Chain A: R.104, R.115, Q.119, E.522 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.104, A:R.104, A:R.115, A:Q.119, A:E.522 Water bridges: A:R.115, A:R.115, A:E.522 GOL.5: 7 residues within 4Å: Chain A: Q.445, K.467, L.541, N.542, L.583, V.584, D.586 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.445, A:K.467, A:K.467, A:N.542, A:D.586 GOL.6: 9 residues within 4Å: Chain A: I.60, R.61, G.64, T.172, T.173, W.317, V.432, T.433, M.434 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.60, A:R.61, A:T.172, A:M.434 Water bridges: A:T.172

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.7: 7 residues within 4Å: Chain A: E.158, A.162, H.163, D.423, E.424, H.428, A.429 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.163, A:A.429 Salt bridges: A:H.163, A:H.428 ACT.8: 8 residues within 4Å: Chain A: R.93, E.97, V.442, Y.475, L.477, F.528, F.588, D.589 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.442, A:Y.475, A:L.477, A:F.588 Hydrogen bonds: A:E.97 Water bridges: A:E.97, A:R.126 Salt bridges: A:R.93, A:R.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Becker, A. et al., Structure of CARDS toxin, a unique ADP-ribosylating and vacuolating cytotoxin from Mycoplasma pneumoniae. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-04-08

Peptides

ADP-ribosylating toxin CARDS: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ADP-ribosylating toxin CARDS

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