SMTL ID : 4tmc.1 (1 other biounit)

CRYSTAL STRUCTURE of OLD YELLOW ENZYME from CANDIDA MACEDONIENSIS AKU4588 COMPLEXED with P-HYDROXYBENZALDEHYDE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 21 residues within 4Å: Chain A: P.34, A.35, L.36, T.37, G.72, Q.114, H.191, N.194, R.243, V.288, V.292, P.295, V.323, G.324, N.325, Y.346, G.347, R.348, F.374, Y.375 Ligands: HBA.2 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:L.36, A:P.295, A:R.348, A:F.374, A:Y.375 Hydrogen bonds: A:A.35, A:T.37, A:T.37, A:G.72, A:Q.114, A:Q.114, A:N.194, A:R.243, A:R.243, A:N.325, A:G.347, A:R.348 Water bridges: A:E.299, A:G.324, A:Y.326, A:R.348, A:S.349 Salt bridges: A:R.348 FMN.3: 20 residues within 4Å: Chain B: P.34, A.35, L.36, T.37, G.72, Q.114, H.191, N.194, R.243, V.292, P.295, V.323, G.324, N.325, Y.346, G.347, R.348, F.374, Y.375 Ligands: HBA.4 24 PLIP interactions: 24 interactions with chain B Hydrophobic interactions: B:L.36, B:P.295, B:R.348, B:F.374, B:F.374, B:Y.375 Hydrogen bonds: B:A.35, B:T.37, B:T.37, B:G.72, B:Q.114, B:Q.114, B:N.194, B:R.243, B:R.243, B:N.325, B:G.347, B:R.348 Water bridges: B:G.324, B:G.324, B:R.348, B:R.348, B:S.349 Salt bridges: B:R.348

2 x HBA: P-HYDROXYBENZALDEHYDE(Non-covalent)

HBA.2: 8 residues within 4Å: Chain A: T.37, W.116, H.191, N.194, Y.196, F.296, Y.375 Ligands: FMN.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.116, A:Y.196 Hydrogen bonds: A:N.194 HBA.4: 9 residues within 4Å: Chain B: T.37, W.116, H.191, N.194, Y.196, P.295, F.296, Y.375 Ligands: FMN.3 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:W.116, B:N.194, B:Y.196, B:P.295 Hydrogen bonds: B:N.194, B:Y.375

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Horita, S. et al., An Engineered Old Yellow Enzyme that Enables Efficient Synthesis of (4R,6R)-Actinol in a One-Pot Reduction System. Chembiochem (2015)

Release Date

2015-02-11

Peptides

Old yellow enzyme: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Old yellow enzyme

Related Entries With Identical Sequence