SMTL ID : 4tmf.1 (1 other biounit)

Crystal structure of human CD38 in complex with hydrolysed compound JMS713

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x JS2: 5-O-[(R)-{[(S)-[4-(8-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)butoxy](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-alpha-D- ribofuranose(Non-covalent)

JS2.1: 15 residues within 4Å: Chain A: L.81, W.82, S.83, R.84, K.86, L.102, E.103, D.112, D.113, W.146, S.150, S.177, T.178, F.179, E.183 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:W.82, A:W.82, A:R.84, A:K.86, A:D.113, A:T.178, A:F.179 Water bridges: A:L.80, A:L.102, A:L.114, A:L.114, A:L.114 Salt bridges: A:R.84, A:E.103 pi-Stacking: A:W.146, A:W.146, A:W.146 pi-Cation interactions: A:W.146, A:W.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Swarbrick, J.M. et al., Cyclic adenosine 5'-diphosphate ribose analogs without a "southern" ribose inhibit ADP-ribosyl cyclase-hydrolase CD38. J.Med.Chem. (2014)

Release Date

2015-05-13

Peptides

ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1

Related Entries With Identical Sequence