SMTL ID : 4tt0.1

Crystal structure of fragment 1600-1733 of HSV1 UL36 in the presence of 1M potassium iodide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

40 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 2 residues within 4Å: Chain A: L.115, L.116 Ligand excluded by PLIP IOD.2: 2 residues within 4Å: Chain A: R.31, L.34 Ligand excluded by PLIP IOD.3: 1 residues within 4Å: Chain A: A.26 Ligand excluded by PLIP IOD.4: 3 residues within 4Å: Chain A: T.102, H.103, P.104 Ligand excluded by PLIP IOD.5: 3 residues within 4Å: Chain A: S.64, A.65 Chain B: L.105 Ligand excluded by PLIP IOD.6: 2 residues within 4Å: Chain A: K.47, A.56 Ligand excluded by PLIP IOD.7: 2 residues within 4Å: Chain A: R.30, Q.33 Ligand excluded by PLIP IOD.8: 3 residues within 4Å: Chain A: Q.119 Chain B: E.73, V.76 Ligand excluded by PLIP IOD.9: 1 residues within 4Å: Chain A: R.31 Ligand excluded by PLIP IOD.10: 2 residues within 4Å: Chain A: V.48 Chain B: H.95 Ligand excluded by PLIP IOD.11: 1 residues within 4Å: Chain A: R.118 Ligand excluded by PLIP IOD.12: 4 residues within 4Å: Chain A: L.3, G.4, Q.8, E.12 Ligand excluded by PLIP IOD.13: 1 residues within 4Å: Chain A: P.113 Ligand excluded by PLIP IOD.14: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.15: 3 residues within 4Å: Chain B: G.114, L.115, L.116 Ligand excluded by PLIP IOD.16: 3 residues within 4Å: Chain B: T.58, L.59, Q.71 Ligand excluded by PLIP IOD.17: 3 residues within 4Å: Chain B: K.7, A.11, T.14 Ligand excluded by PLIP IOD.18: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.19: 1 residues within 4Å: Chain B: R.28 Ligand excluded by PLIP IOD.20: 1 residues within 4Å: Chain B: K.47 Ligand excluded by PLIP IOD.21: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.22: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.23: 1 residues within 4Å: Chain B: Q.8 Ligand excluded by PLIP IOD.24: 2 residues within 4Å: Chain B: E.29, Q.33 Ligand excluded by PLIP IOD.25: 1 residues within 4Å: Chain A: H.95 Ligand excluded by PLIP IOD.26: 3 residues within 4Å: Chain B: A.53, A.56, K.57 Ligand excluded by PLIP IOD.27: 1 residues within 4Å: Chain B: A.26 Ligand excluded by PLIP IOD.28: 3 residues within 4Å: Chain B: R.28, R.31 Ligands: IOD.36 Ligand excluded by PLIP IOD.29: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.30: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.31: 3 residues within 4Å: Chain B: E.15, T.18, R.22 Ligand excluded by PLIP IOD.32: 3 residues within 4Å: Chain B: G.1, G.4, S.5 Ligand excluded by PLIP IOD.33: 2 residues within 4Å: Chain B: G.1, P.2 Ligand excluded by PLIP IOD.34: 1 residues within 4Å: Chain B: R.118 Ligand excluded by PLIP IOD.35: 2 residues within 4Å: Chain B: A.27, R.30 Ligand excluded by PLIP IOD.36: 3 residues within 4Å: Chain B: A.27, R.31 Ligands: IOD.28 Ligand excluded by PLIP IOD.37: 1 residues within 4Å: Chain B: Q.78 Ligand excluded by PLIP IOD.38: 3 residues within 4Å: Chain B: P.52, A.53, T.54 Ligand excluded by PLIP IOD.39: 2 residues within 4Å: Chain A: E.84 Chain B: R.131 Ligand excluded by PLIP IOD.40: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scrima, N. et al., Insights into Herpesvirus Tegument Organization from Structural Analyses of the 970 Central Residues of HSV-1 UL36 Protein. J.Biol.Chem. (2015)

Release Date

2015-02-18

Peptides

Deneddylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Deneddylase

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