SMTL ID : 4twc.1 (1 other biounit)

2-Benzamido-N-(1H-benzo[d]imidazol-2-yl)thiazole-4- carboxamide derivatives as potent inhibitors of CK1d/e

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.127, K.154, K.171, E.189 7 PLIP interactions: 7 interactions with chain A Water bridges: A:R.127, A:R.127, A:K.171, A:E.189 Salt bridges: A:R.127, A:K.154, A:K.171 SO4.2: 5 residues within 4Å: Chain A: R.178, Q.214, G.215, K.224, I.228 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.215 Water bridges: A:R.178, A:Q.214, A:Q.214, A:L.216, A:K.224 Salt bridges: A:R.178, A:K.224 SO4.3: 4 residues within 4Å: Chain A: R.157, H.162, R.192, K.263 7 PLIP interactions: 7 interactions with chain A Water bridges: A:R.157, A:R.157, A:H.162, A:R.192 Salt bridges: A:R.157, A:R.192, A:K.263 SO4.4: 4 residues within 4Å: Chain A: S.267, R.270, Q.271, R.274 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.271 Water bridges: A:R.270, A:R.274, A:R.274, A:R.274 Salt bridges: A:R.270, A:R.274

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 4 residues within 4Å: Chain A: R.193, L.258, R.259, F.260 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.193, A:L.258, A:F.260 Water bridges: A:R.193, A:D.261

2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.6: 5 residues within 4Å: Chain A: K.14, I.15, G.16, L.25 Ligands: 37J.7 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.15, A:L.25 Hydrogen bonds: A:K.14, A:I.15 Water bridges: A:S.17 BOG.8: 3 residues within 4Å: Chain A: N.94, F.95, L.293 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.95, A:L.293 Water bridges: A:N.94

1 x 37J: 2-{[2-(trifluoromethoxy)benzoyl]amino}-N-[6-(trifluoromethyl)-1H-benzimidazol-2-yl]-1,3-thiazole-4-carboxamide(Non-covalent)

37J.7: 18 residues within 4Å: Chain A: I.15, I.23, A.36, Y.56, M.80, M.82, E.83, L.84, L.85, G.86, P.87, D.91, L.92, F.95, L.135, I.148, L.293 Ligands: BOG.6 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.23, A:A.36, A:M.82, A:L.85, A:D.91, A:D.91 Hydrogen bonds: A:L.85, A:L.85, A:D.91 Water bridges: A:S.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bischof, J. et al., 2-Benzamido-N-(1H-benzo[d]imidazol-2-yl)thiazole-4-carboxamide derivatives as potent inhibitors of CK1d/e. Amino Acids (2012)

Release Date

2014-10-08

Peptides

Casein kinase I isoform delta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Casein kinase I isoform delta

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