SMTL ID : 4tzh.2 (1 other biounit)

Structure of Leptospira interrogans LRR protein LIC12234

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.39 Å

Oligo State

monomer

Ligands

5 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: R.177, T.186, I.187 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: S.45, H.47 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: S.26, H.47, R.49, D.70 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain A: E.108 Ligands: ZN.6, CL.8 Ligand excluded by PLIP CL.8: 5 residues within 4Å: Chain A: G.107, E.108, Q.131 Ligands: ZN.6, CL.7 Ligand excluded by PLIP

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 2 residues within 4Å: Chain A: H.7, D.12 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.7, H2O.1 ZN.6: 4 residues within 4Å: Chain A: K.87, E.108 Ligands: CL.7, CL.8 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.108

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.5: 3 residues within 4Å: Chain A: K.81, P.103, E.104 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.104 Water bridges: A:L.102 Salt bridges: A:K.81 ACT.9: 4 residues within 4Å: Chain A: E.90, V.91, G.113, I.114 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:E.90, A:V.91, A:I.114 Hydrogen bonds: A:E.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miras, I. et al., Structural characterization of a novel subfamily of leucine-rich repeat proteins from the human pathogen Leptospira interrogans. Acta Crystallogr.,Sect.D (2015)

Release Date

2015-06-03

Peptides

LIC12234: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

LIC12234

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