SMTL ID : 4u10.1 (1 other biounit)

Probing the structure and mechanism of de-N-acetylase from aggregatibacter actinomycetemcomitans

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: D.75, H.144, H.149 Ligands: ZN.2 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.75, A:H.144, A:H.149, H2O.2, H2O.4 ZN.2: 4 residues within 4Å: Chain A: H.10, D.74 Ligands: ZN.1, CL.4 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.10, A:D.74, H2O.2 ZN.3: 2 residues within 4Å: Chain A: K.42, D.43 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.43, A:D.43

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 7 residues within 4Å: Chain A: H.10, D.74, Y.210, G.211, L.232, R.247 Ligands: ZN.2 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Varudharsu, D. et al., Probing the structure and mechanism of de-N-acetylase from aggregatibacter actinomycetemcomitans. To Be Published

Release Date

2015-01-14

Peptides

Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase

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