SMTL ID : 4u60.1

Trichodysplasia spinulosa-associated polyomavirus (TSPyV) VP1 in complex with GM1 oligosaccharide

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.50 Å
Oligo State
homo-pentamer
Ligands
5 x SIA: O-SIALIC ACID(Non-covalent)
6 x GAL: BETA-D-GALACTOSE(Non-functional Binders)(Non-covalent)
4 x NGA: N-ACETYL-D-GALACTOSAMINE(Non-functional Binders)(Non-covalent)
9 x GOL: GLYCEROL(Non-functional Binders)
5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
2 x BGC: BETA-D-GLUCOSE(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Stroh, L.J. et al., Trichodysplasia spinulosa-Associated Polyomavirus Uses a Displaced Binding Site on VP1 to Engage Sialylated Glycolipids. Plos Pathog. (2015)
Peptides
Structural protein VP1: ABCDE
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E

Structural protein VP1

Toggle Identical (AE)

Related Entries With Identical Sequence

4u5z.1 | 4u5z.2 | 4u61.1 | 4u61.2 | 4u62.1 | 4u62.2