SMTL ID : 4u82.1 (1 other biounit)

Structure of S. aureus undecaprenyl diphosphate synthase in complex with FSPP and sulfate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: D.33, R.37 Ligands: FPS.2, SO4.3 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.33, H2O.1, H2O.2

1 x FPS: S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE(Non-covalent)

FPS.2: 20 residues within 4Å: Chain A: M.32, D.33, G.34, N.35, G.36, R.37, R.46, H.50, M.54, I.57, A.76, N.81, R.84, E.88, I.92, L.95, P.96, F.99, F.148 Ligands: MG.1 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:I.57, A:A.76, A:I.92, A:L.95, A:P.96, A:F.99, A:F.148, A:F.148 Hydrogen bonds: A:D.33, A:G.34, A:G.34, A:N.35, A:G.36, A:R.37, A:R.46, A:R.84, A:R.84 Water bridges: A:R.46, A:R.46, A:R.46, A:R.46 Salt bridges: A:R.37, A:R.46

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: R.201, R.207, S.209 Ligands: MG.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.209 Water bridges: A:R.84, A:R.84, A:R.84, A:R.201, A:R.201, A:R.201 Salt bridges: A:R.201, A:R.207

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, W. et al., Antibacterial drug leads: DNA and enzyme multitargeting. J.Med.Chem. (2015)

Release Date

2015-02-04

Peptides

Isoprenyl transferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Isoprenyl transferase

Related Entries With Identical Sequence