SMTL ID : 4url.1 (1 other biounit)

Crystal Structure of Staph ParE43kDa in complex with KBD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

monomer

Ligands

1 x XAM: (1R,4aS,5S,6S,8aR)-5-{[(5S)-1-(3-O-acetyl-4-O-carbamoyl-6-deoxy-2-O-methyl-alpha-L-talopyranosyl)-4-hydroxy-2-oxo-5-(propan-2-yl)-2,5-dihydro-1H-pyrrol-3-yl]carbonyl}-6-methyl-4-methylidene-1,2,3,4,4a,5,6,8a-octahydronaphthalen-1-yl 2,6-dideoxy-3-C-[(1S)-1-{[(3,4-dichloro-5-methyl-1H-pyrrol-2-yl)carbonyl]amino}ethyl]-beta-D-ribo-hexopyranoside(Non-covalent)

XAM.1: 19 residues within 4Å: Chain A: I.46, N.49, S.50, E.53, D.76, R.79, M.81, P.82, H.86, K.87, T.92, V.95, I.96, L.100, H.101, A.102, G.103, T.168, V.170 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.46, A:T.92, A:I.96, A:T.168 Hydrogen bonds: A:E.53, A:D.76, A:K.87, A:H.101, A:G.103 Water bridges: A:R.79, A:R.79, A:T.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, J. et al., Structures of Kibdelomycin Bound to Staphylococcus Aureus Gyrb and Pare Showed a Novel U-Shaped Binding Mode. Acs Chem.Biol. (2014)

Release Date

2014-07-16

Peptides

DNA TOPOISOMERASE IV, B SUBUNIT: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA TOPOISOMERASE IV, B SUBUNIT

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