SMTL ID : 4uvm.1

In meso crystal structure of the POT family transporter PepTSo

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x 78M: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE(Non-covalent)

78M.1: 12 residues within 4Å: Chain A: V.55, D.58, V.59, S.62, G.66, F.69, Y.113, L.116, F.117, A.120, V.258, C.262 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.69, A:Y.113, A:L.116, A:F.117, A:A.120, A:V.258 Hydrogen bonds: A:D.58, A:S.62, A:Y.113

4 x 78N: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE(Non-covalent)

78N.2: 5 residues within 4Å: Chain A: L.73, F.82, N.86, T.87, W.90 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.73, A:F.82, A:W.90 Hydrogen bonds: A:N.86, A:W.90 78N.3: 9 residues within 4Å: Chain A: F.215, V.268, M.269, V.272, L.302, G.440, T.441, S.444, F.445 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.215, A:V.268, A:V.272, A:L.302, A:F.445 Hydrogen bonds: A:G.440 Water bridges: A:T.441, A:T.441 78N.4: 8 residues within 4Å: Chain A: G.270, G.273, A.274, S.277, R.296, L.299, V.303, Y.502 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.277, A:R.296 78N.5: 7 residues within 4Å: Chain A: W.10, I.14, P.15, I.18, A.19, C.23, M.152 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:P.15, A:I.18

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Fowler, P.W. et al., Gating Topology of the Proton-Coupled Oligopeptide Symporters. Structure (2015)

Release Date

2015-02-04

Peptides

GLUTATHIONE UPTAKE TRANSPORTER: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GLUTATHIONE UPTAKE TRANSPORTER

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