SMTL ID : 4v35.1

The Structure of A-PGS from Pseudomonas aeruginosa

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: R.287, F.291, Y.292, N.293, F.294, Q.295 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:F.291, A:N.293, A:F.294, A:Q.295 Salt bridges: A:R.287 SO4.2: 4 residues within 4Å: Chain A: R.23, R.26, H.27, D.218 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.26, A:H.27

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: Q.30, R.75, R.99, E.101, N.102 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.30, A:R.75, A:R.99, A:N.102, A:N.102 Water bridges: A:R.75, A:E.101 GOL.4: 3 residues within 4Å: Chain A: P.71, A.72, R.75 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.72, A:R.75 Water bridges: A:R.75, A:R.75 GOL.16: 1 residues within 4Å: Chain A: R.279 No protein-ligand interaction detected (PLIP)

7 x ACT: ACETATE ION(Non-functional Binders)

ACT.5: 2 residues within 4Å: Chain A: G.288, E.289 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.288 ACT.6: 4 residues within 4Å: Chain A: A.9, I.10, R.57, H.89 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.57, A:H.89 ACT.7: 3 residues within 4Å: Chain A: R.60, H.90, R.92 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.60, A:R.92 ACT.8: 1 residues within 4Å: Chain A: M.262 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:M.262 Water bridges: A:S.185, A:S.185, A:M.262 ACT.9: 3 residues within 4Å: Chain A: R.287, G.288, E.289 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.289 ACT.10: 3 residues within 4Å: Chain A: Q.295, G.296, R.298 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Q.295 Hydrogen bonds: A:G.296 Water bridges: A:L.297 Salt bridges: A:R.298 ACT.11: 2 residues within 4Å: Chain A: P.235, K.236 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.236

1 x CA: CALCIUM ION(Non-covalent)

CA.12: 2 residues within 4Å: Chain A: R.83, P.316 No protein-ligand interaction detected (PLIP)

1 x NA: SODIUM ION(Non-functional Binders)

NA.13: 1 residues within 4Å: Chain A: E.77 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.77

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.14: 1 residues within 4Å: Chain A: R.140 Ligand excluded by PLIP CL.15: 1 residues within 4Å: Chain A: R.198 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hebecker, S. et al., Structures of Two Bacterial Resistance Factors Mediating tRNA-Dependent Aminoacylation of Phosphatidylglycerol with Lysine or Alanine. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-08-19

Peptides

ALANYL-TRNA-DEPENDENT L-ALANYL- PHOPHATIDYLGLYCEROL SYNTHASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ALANYL-TRNA-DEPENDENT L-ALANYL- PHOPHATIDYLGLYCEROL SYNTHASE

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