SMTL ID : 4w6f.1

Crystal Structure of Full-Length Split GFP Mutant K26C Disulfide Dimer, P 32 2 1 Space Group, Form 2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

4 x IMD: IMIDAZOLE(Non-covalent)

IMD.1: 6 residues within 4Å: Chain A: D.20, G.21 Chain B: H.22 Ligands: NI.2, IMD.3, IMD.5 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.20 IMD.3: 7 residues within 4Å: Chain A: H.22 Chain B: D.20, H.22, C.27 Ligands: IMD.1, NI.2, IMD.4 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:H.22 pi-Stacking: A:H.22 IMD.4: 7 residues within 4Å: Chain B: H.22, E.123, L.124, K.125 Ligands: NI.2, IMD.3, IMD.5 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.124 pi-Stacking: B:H.22 IMD.5: 7 residues within 4Å: Chain A: D.20, E.123 Chain B: H.22, K.125 Ligands: IMD.1, NI.2, IMD.4 1 PLIP interactions: 1 interactions with chain B pi-Stacking: B:H.22

1 x NI: NICKEL (II) ION(Non-covalent)

NI.2: 5 residues within 4Å: Chain B: H.22 Ligands: IMD.1, IMD.3, IMD.4, IMD.5 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:H.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Leibly, D.J. et al., A Suite of Engineered GFP Molecules for Oligomeric Scaffolding. Structure (2015)

Release Date

2015-02-18

Peptides

fluorescent protein D21H/K26C: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

fluorescent protein D21H/K26C

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