SMTL ID : 4w7r.1 (1 other biounit)

Crystal Structure of Full-Length Split GFP Mutant E124H/K126H Copper Mediated Dimer, P 21 Space Group

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

1 x CU: COPPER (II) ION(Non-covalent)

CU.1: 4 residues within 4Å: Chain A: H.123, H.125 Chain B: H.123, H.125 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Metal complexes: B:H.123, B:H.125, A:H.123, A:H.125

7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: F.144, N.145, S.146, Q.203, T.204 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.145, A:T.204 EDO.3: 8 residues within 4Å: Chain A: A.86, E.89, G.90, P.186, I.187, G.188, D.189, G.190 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.90, A:G.90, A:I.187, A:G.188, A:G.190 EDO.4: 5 residues within 4Å: Chain A: N.158, G.190, P.191, V.192, L.194 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.158, A:G.190, A:V.192 EDO.5: 3 residues within 4Å: Chain B: S.207, K.208, L.210 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.207, B:K.208 Water bridges: B:S.207 EDO.6: 7 residues within 4Å: Chain A: H.125 Chain B: D.22, N.24, G.25, H.125, G.126, I.127 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.24, B:G.25, B:G.126, A:H.125 EDO.7: 5 residues within 4Å: Chain B: H.76, M.77, A.226, G.227 Ligands: EDO.8 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:H.76, B:G.227 EDO.8: 3 residues within 4Å: Chain B: H.76, G.227 Ligands: EDO.7 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Leibly, D.J. et al., A Suite of Engineered GFP Molecules for Oligomeric Scaffolding. Structure (2015)

Release Date

2015-03-04

Peptides

fluorescent protein E124H/K126C: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

fluorescent protein E124H/K126C

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