- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x IMD: IMIDAZOLE(Non-covalent)
- 6 x ACT: ACETATE ION(Non-functional Binders)
ACT.2: 6 residues within 4Å:- Chain A: V.13, H.14, G.232, P.233, G.234, S.235
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:V.13, A:H.14
- Hydrogen bonds: A:H.14, A:G.234, A:S.235
ACT.5: 3 residues within 4Å:- Chain A: H.86, P.180
- Chain C: I.119
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:H.86
ACT.8: 6 residues within 4Å:- Chain B: V.13, H.14, G.232, P.233, G.234, S.235
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:V.13, B:H.14
- Hydrogen bonds: B:H.14, B:G.234, B:S.235
ACT.11: 3 residues within 4Å:- Chain A: I.119
- Chain B: H.86, P.180
1 PLIP interactions:1 interactions with chain B- Salt bridges: B:H.86
ACT.14: 6 residues within 4Å:- Chain C: V.13, H.14, G.232, P.233, G.234, S.235
5 PLIP interactions:5 interactions with chain C- Hydrophobic interactions: C:V.13, C:H.14
- Hydrogen bonds: C:H.14, C:G.234, C:S.235
ACT.17: 3 residues within 4Å:- Chain B: I.119
- Chain C: H.86, P.180
1 PLIP interactions:1 interactions with chain C- Salt bridges: C:H.86
- 3 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.3: 3 residues within 4Å:- Chain A: N.440, L.467, F.471
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.440
PEG.9: 3 residues within 4Å:- Chain B: N.440, L.467, F.471
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.440
PEG.15: 3 residues within 4Å:- Chain C: N.440, L.467, F.471
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.440
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.4: 2 residues within 4Å:- Chain A: D.428, I.429
No protein-ligand interaction detected (PLIP)EDO.6: 3 residues within 4Å:- Chain A: V.193, N.208, K.238
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:V.193, A:N.208, A:K.238, A:K.238
- Water bridges: A:V.193
EDO.10: 2 residues within 4Å:- Chain B: D.428, I.429
No protein-ligand interaction detected (PLIP)EDO.12: 3 residues within 4Å:- Chain B: V.193, N.208, K.238
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:V.193, B:N.208, B:K.238, B:K.238
- Water bridges: B:V.193
EDO.16: 2 residues within 4Å:- Chain C: D.428, I.429
No protein-ligand interaction detected (PLIP)EDO.18: 3 residues within 4Å:- Chain C: V.193, N.208, K.238
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:V.193, C:N.208, C:K.238, C:K.238
- Water bridges: C:V.193
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Koc, C. et al., Structural and Enzymatic Analysis of TarM Glycosyltransferase from Staphylococcus aureus Reveals an Oligomeric Protein Specific for the Glycosylation of Wall Teichoic Acid. J.Biol.Chem. (2015)
- Release Date
- 2015-02-25
- Peptides
- Glycosyl transferase, group 1 family protein: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x IMD: IMIDAZOLE(Non-covalent)
- 6 x ACT: ACETATE ION(Non-functional Binders)
- 3 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Koc, C. et al., Structural and Enzymatic Analysis of TarM Glycosyltransferase from Staphylococcus aureus Reveals an Oligomeric Protein Specific for the Glycosylation of Wall Teichoic Acid. J.Biol.Chem. (2015)
- Release Date
- 2015-02-25
- Peptides
- Glycosyl transferase, group 1 family protein: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A